 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462956461 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 388aa MW: 42278.7 Da PI: 5.1922 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462956461 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 34 | 6.1e-11 | 144 | 166 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS
WRKY 1 ldDgynWrKYGqKevkgsefprs 23
ldDgy+WrKYG+K+vk+s++pr
462956461 144 LDDGYRWRKYGKKMVKNSPNPRT 166
59*******************95 PP
|
| 2 | WRKY | 93.1 | 2.1e-29 | 316 | 374 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYG+K+vk+s++pr+YYrC+s+gC+vkk+ve +++d+++v++tY g Hnh+
462956461 316 LDDGYRWRKYGKKMVKNSPNPRNYYRCSSEGCHVKKRVEWERDDERFVITTYDGVHNHP 374
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MSSSYSSLLS PCPADWGAGD SEAMEAADVS SYLSFDVAQE CYYHSPEAAA AAFHSECQGL 60
LGALQEDDVD YSVMSGEAGS NGGREASERS QTDASTVVTP ARLLAIRDTM INEVMSSGDD 120
GRMSLPTGRR GRIAFKTRSD VEVLDDGYRW RKYGKKMVKN SPNPRTIVDG GFRVTLYSSL 180
LLRYGNGGDA EAMAAAAAVS SYLSFAADVP EECYYHSPEA AVAAAFHSER QGLLGALQED 240
DVDYSVMSGE AGSNGGREAS EQSQTDASTV LRPAGLAIRD TMINEGVSSG DDGRMSLPTG 300
RRGRIAFKTR SDVEVLDDGY RWRKYGKKMV KNSPNPRNYY RCSSEGCHVK KRVEWERDDE 360
RFVITTYDGV HNHPAVPLAP HHRRPINL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KR827403 | 3e-62 | KR827403.1 Triticum aestivum WRKY52 transcriptional factor mRNA, complete cds. |
| GenBank | KT728909 | 3e-62 | KT728909.1 Triticum aestivum clone LKc001 WRKY protein mRNA, partial cds. |
| GenBank | KT728910 | 3e-62 | KT728910.1 Triticum aestivum clone LKc002 WRKY protein mRNA, partial cds. |
| GenBank | KT865877 | 3e-62 | KT865877.1 Triticum aestivum clone KL04 WRKY mRNA, partial cds. |
| GenBank | KT865878 | 3e-62 | KT865878.1 Triticum aestivum clone KL05 WRKY mRNA, partial cds. |
