 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462955285 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 378aa MW: 41014.6 Da PI: 10.6408 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462955285 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.2 | 2.6e-31 | 313 | 371 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+
462955285 313 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGDHNHN 371
69*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MEGMEEANRA AVQSCHRVLN LLSNPRGQLV PNKDLVAATG EAVSKFGSLT SKLANGNARQ 60
GHARVRRIKK PLPIIDSNLF LESSAVAGAA TAGHLQLFPR YQQGEGSSSK DPVRIPPQFP 120
KRLLLENPVV DLEGPSQTPP IQLVQPVSVA PPAGTPHPAL PAAHLHFIQQ HQSYQRFQFM 180
QQMKIQSEMM KRSSLGDQGQ GGSNSAGGKG VNLKFDSSNC TASSSRSFLS SLSMEGSLAS 240
LDGSRASRPF QLLSGSQTSS TPELGGQRRR CTGKEDGSGR CATRCHCAKK RKLRIRRSIK 300
VPAISNKVAD IPADEFSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERCVDDPSML 360
IVTYEGDHNH NRVLAQPA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
