PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462953313
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 467aa    MW: 52223.3 Da    PI: 6.6038
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462953313genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.6e-114181441
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
     bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41
                k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  462953313 41 AKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 81
               6889************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-638103IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.684082IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-74086No hitNo description
PfamPF001702.7E-84181IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-74283No hitNo description
PROSITE patternPS0003604560IPR004827Basic-leucine zipper domain
PfamPF141441.5E-27138210IPR025422Transcription factor TGA like domain
PfamPF141441.1E-28259333IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MEELAGSRRQ DHNHLQHQPF AGAGADQGTT AAGIKDVKPL AKTLRRLAQN REAARKSRLR  60
KKAYIQQLES SRIRLAQLEQ ELHTARAQGV FYPSNGLLAD QAVAGKGIPI GGIDGLSSEA  120
AMFDVEYGRW QEEHYRLMYE LRAALQQHLP EGELQMYVES CLAHHDEMMG IKDAVIKGDV  180
FHLTSGVWRS PAERCFLWLG GFRPSEVIKG VFYPSNGLLA DQGVAGKGIP IGGIDGLSSE  240
AAMFDVEYGR WQEEHYRLMY ELRAALQQHL PEGELQMYVE SCLAHHDEMM GIKDAVIKGD  300
VFHLTSGVWR SPAERCFLWL GGFRPSEVIK MLLSHVEPLT EQQIVGVYGL QQSALETEEA  360
LSQGLDALYQ SLSDTVVSDA LSCPSNVANY MGQMAAAMNK LSTLEGFVRQ AENLRQQTLH  420
RLNQILTTRQ MARSLLAVSD YFHRLRTLSS LWVTRPRAPQ DQQQGHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462953313
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9669280.0EU966928.1 Zea mays clone 298194 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025800643.11e-180transcription factor TGA2.1-like
SwissprotQ52MZ21e-114TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2S3H0U71e-179A0A2S3H0U7_9POAL; Uncharacterized protein
TrEMBLA0A2T7ETY91e-179A0A2T7ETY9_9POAL; Uncharacterized protein
TrEMBLA0A3L6QVU11e-179A0A3L6QVU1_PANMI; Putative bZIP transcription factor superfamily protein isoform X1
STRINGPavir.Ba01723.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.21e-104bZIP family protein