PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462952872
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 306aa    MW: 34426.8 Da    PI: 11.0212
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462952872genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.23e-071711961742
                HHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeN 42 
                A+rsR RK+++i+eLe++v++L++e 
  462952872 171 AQRSRVRKLQYIAELERRVQSLQTEG 196
                89********************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-5160219IPR004827Basic-leucine zipper domain
CDDcd147037.18E-16161211No hitNo description
SuperFamilySSF579595.23E-6170213No hitNo description
Gene3DG3DSA:1.20.5.1704.0E-7171213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDTSARRRRA SSSMSSRRGW TICSTSPRRX PGRPGHRRSS SDSFALFDGG ASSGMYDNVL  60
DGRRGGGQVA SWTGAPEFFP DPSSFGRQQG RPWDSRQMFR QGGGMPMPAR EKIGGRHGPS  120
SAFGDHEHGP VPNGVDRKGH GDAALDQRKD GVNLRHSQSE ADTKRAKQQY AQRSRVRKLQ  180
YIAELERRVQ SLQTEGIEVS AEMDFLGQQN IMLDLENKAL KQRLESLSQE HLIKRYQQEM  240
FEREISRLRS LFQQQQQQPQ SQHVPQQQAP THSRSNSRDL DSQFANLSLK HSDPNSGRDA  300
VSGLRI
Cis-element ? help Back to Top
SourceLink
PlantRegMap462952872
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002441963.21e-153uncharacterized protein At4g06598
TrEMBLA0A3L6T2U01e-159A0A3L6T2U0_PANMI; Uncharacterized protein
STRINGPavir.Ca00279.1.p1e-151(Panicum virgatum)
STRINGGRMZM2G024851_P011e-151(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.28e-47bZIP family protein