 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462942509 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 193aa MW: 21076.2 Da PI: 9.1994 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462942509 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 26.3 | 1.3e-08 | 4 | 68 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC.................TTS-.STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkas..............kapskK.lsKaeiLekAveYIksLq 55
+ +E++RR +++ +L +llP+a ++p+k ++ + Le A YIk+L+
462942509 4 KDVEKNRRLHMKGLCLKLSSLLPPAAkqasllqatvpatcSNPNKDtVTQLDHLENAAAYIKQLK 68
689*********************666*************7777777****************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MERKDVEKNR RLHMKGLCLK LSSLLPPAAK QASLLQATVP ATCSNPNKDT VTQLDHLENA 60
AAYIKQLKGR IEELKRRKGG AGGDGSCKKQ RVEVATAGVR MPVIEVRYQD GTLDVVLISE 120
AGRPFKLHEV ITVLEQEGAE VVSASFSVVG DKIFYTIHSQ ALSSRIGLEA TRVSERLQDL 180
LKNSAVVATD DLQ
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP094213 | 8e-89 | FP094213.1 Phyllostachys edulis cDNA clone: bphylf003c24, full insert sequence. |
