PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462940842
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CAMTA
Protein Properties Length: 879aa    MW: 98716.8 Da    PI: 7.276
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462940842genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1166.35.1e-52121272116
       CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                ++e k+rwl ++e+++iL+n+e ++++++++++p+sgs++Lynr+++r fr+DGy+w+kkk+gk+++E+he+LKv++vevl+cyY+++++nptf+rr+yw
  462940842  12 QQEvKTRWLSPKEVLQILQNYEWFTISQKPAQKPPSGSWFLYNRRVLRLFRNDGYTWQKKKNGKSTNEAHERLKVDNVEVLSCYYSRGDQNPTFRRRIYW 111
                56779*********************************************************************************************** PP

       CG-1 101 lLeeelekivlvhyle 116
                +L+ ++++ivlvhy++
  462940842 112 MLDPAYDHIVLVHYRD 127
                **************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143771.6398134IPR005559CG-1 DNA-binding domain
SMARTSM010761.1E-6111129IPR005559CG-1 DNA-binding domain
PfamPF038592.4E-4615127IPR005559CG-1 DNA-binding domain
CDDcd001022.24E-5294378No hitNo description
PfamPF018334.6E-5295364IPR002909IPT domain
SuperFamilySSF812962.03E-12295376IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.103.5E-6295382IPR013783Immunoglobulin-like fold
SuperFamilySSF484031.01E-13496589IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.202.8E-14497590IPR020683Ankyrin repeat-containing domain
PfamPF136371.2E-7499549No hitNo description
CDDcd002045.70E-8500545No hitNo description
PROSITE profilePS5029714.902500560IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.099528560IPR002110Ankyrin repeat
SMARTSM00015210649671IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.522650679IPR000048IQ motif, EF-hand binding site
SMARTSM000150.32694716IPR000048IQ motif, EF-hand binding site
PfamPF006120.14696715IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.888696724IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0038717739IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.816718746IPR000048IQ motif, EF-hand binding site
PfamPF006120.0039719739IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    Send to blast
MQQQGFDINK LQQEVKTRWL SPKEVLQILQ NYEWFTISQK PAQKPPSGSW FLYNRRVLRL  60
FRNDGYTWQK KKNGKSTNEA HERLKVDNVE VLSCYYSRGD QNPTFRRRIY WMLDPAYDHI  120
VLVHYRDEGS ISLSLRNDAS TSNQNGSAGR AEVHSSPGWT SGLTAPCSNS CSPGSVEEVS  180
SRTMTINNDT NNTSPSDRLQ EKAALRKLKM QLSLEDKEDY DVNTKEVLPN NEPILVHGIQ  240
VGEPEDCTNL DDIFNVLEFS EDHTKEAGTR PFPSAIDVLK SSASMTVTEN QWFHIDEVSP  300
EWGFASESTK VIIVGDFLCS TSESCAMMFG DVKVPVETVQ QGVVRCHTPC LGHGKVRMYM  360
VDVNGKPCSE AREFKFLERP TKSMIDGNAK PCNEARDFVS DHKPTRSSDE LLLLLNYVQM  420
LFDGHGCEQL PKASLQLSNL DCSFKVNLIK EADEQLDRES TINNVMEVLL TDKFEQWLLS  480
KVEQSSDGDH LLPKQYHCVI HMIAALGYEW ALKPLLSSGV PVNYRDSNGW TALHWAARFG  540
REGTVAALLA AGAAAGALSH PTSEDPAAKT PASIASAYGF SGLSAFLSEA QLLTHLDSLE  600
SKQKGNCNDG ASGGGILCSV DRIWDKCTYV HGGTDDQLAL KDSLGAIRNA VQAAGRIQAA  660
FRVFSFRKKQ EMAHQNRNSC SLSIHETVAV SHSIVEKAAL SIQKNFRCWK RRNEFVRMRK  720
NVIKIQARVR AHQERKKYRE LLRSVGVLEK LMLRWYKKGV GLRGFSSGAM PIDEEVEEDV  780
VKLFRKQRVE TAINEAVTRS CCVGLRGFNS GAMPIDEEME GDIVKLFRKQ RVETAINEAV  840
TRVSSIIDSP AARQQYRRML EIYQQAKNSS KDFIPEEAL
Cis-element ? help Back to Top
SourceLink
PlantRegMap462940842
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971097.10.0calmodulin-binding transcription activator 4
TrEMBLA0A0A9AIS60.0A0A0A9AIS6_ARUDO; Uncharacterized protein
STRINGSi000282m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-100Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains