 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462933062 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
GATA |
| Protein Properties |
Length: 211aa MW: 22856.9 Da PI: 8.4714 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462933062 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 31.2 | 3e-10 | 99 | 119 | 1 | 21 |
GATA 1 CsnCgttkTplWRrgpdgnkt 21
C+ C+ttkTplWR gp+g+k
462933062 99 CADCHTTKTPLWRGGPEGPKA 119
******************996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
LRPPLSSVSL VTQTEGVKLK PLLDFSIAFA SPALPPSSIY PTSPQSNPHP LPRPSSRSSI 60
KDWISAADQE NMEAEMETDP ISPSPDDTTT ASGGEAKACA DCHTTKTPLW RGGPEGPKAL 120
GLDANAEPQD QQQKKKAAAA ASSSKEDKKK EDKEEEGDKK KQVTVELRVV GFGKEVMLKQ 180
RRRMRRKKCL SEEERAAVLL MSLSSGVIYA S
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 179 | 185 | QRRRMRR |
| 2 | 180 | 187 | RRRMRRKK |
