PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462932634 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | TALE | ||||||||
Protein Properties | Length: 1023aa MW: 114039 Da PI: 6.5393 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.6 | 1e-08 | 783 | 820 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +q+++WF N R + 462932634 783 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 820 665559******************************88 PP | |||||||
2 | BELL | 118.3 | 3.6e-38 | 500 | 571 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k akL+ +l+eVd++Yk+y++q+qtv+ssF++vag g+akpYt++Al++iSrhFrcLkdai +qi 462932634 500 EKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGAAKPYTAVALHTISRHFRCLKDAINDQI 571 689*******************************************************************98 PP | |||||||
3 | BELL | 93.1 | 2.7e-30 | 662 | 717 | 17 | 72 |
BELL 17 eeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +Vd++Yk+y++q+qtv+ssF++vag g+akpYt++Al++iSrhFrcLkdai +qi 462932634 662 SQVDRKYKHYYHQMQTVVSSFDVVAGPGAAKPYTAVALHTISRHFRCLKDAINDQI 717 58****************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 8.1E-5 | 194 | 332 | IPR006563 | POX domain |
Pfam | PF07526 | 3.3E-16 | 200 | 287 | IPR006563 | POX domain |
SMART | SM00574 | 1.3E-56 | 424 | 569 | IPR006563 | POX domain |
Pfam | PF07526 | 1.1E-50 | 430 | 567 | IPR006563 | POX domain |
Gene3D | G3DSA:1.10.10.60 | 4.1E-15 | 617 | 665 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 0.18 | 618 | 677 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.46E-4 | 618 | 670 | No hit | No description |
SuperFamily | SSF46689 | 2.35E-8 | 619 | 677 | IPR009057 | Homeodomain-like |
SMART | SM00574 | 6.1E-9 | 626 | 715 | IPR006563 | POX domain |
Pfam | PF05920 | 3.2E-8 | 635 | 665 | IPR008422 | Homeobox KN domain |
Pfam | PF07526 | 3.5E-25 | 663 | 713 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.325 | 761 | 824 | IPR001356 | Homeobox domain |
SMART | SM00389 | 3.6E-9 | 764 | 828 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.75E-11 | 764 | 825 | No hit | No description |
SuperFamily | SSF46689 | 5.13E-17 | 765 | 830 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.2E-27 | 767 | 830 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.8E-17 | 781 | 820 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1023 aa Download sequence Send to blast |
MATYYSSPGT ERDSQNMYSR DPGGASYPMP SALGNLLYLN NPTSGPYTEF SGILQSQQNC 60 MEIPDPGHPS VMSQDSSARE SDMLGSHQGQ HSFNSVKDMK NEMLMHMMDG SQSSTANLIH 120 DDAHNGAQLE FGVLNNHSPS NVHSVQGQGL SLSLNTQILA PSLPYWSIKP DMLSPQSYHD 180 SLRVDDIRMK SMQSEASRAI RNSRYLKAAQ ELLDEVVNVW KNIKQKAQKE QGDAGKADGK 240 ENEGGPKSEG VSSNPQESAA NTAPELSTAE KQELQNKMAK LMAMLDEQNC MEIPDPGHPS 300 VMSQDSSARE SDMLGSHQGQ HSFNSVKDMK NEMLMHMMDG SQSSTANLIH DDAHNGAQLE 360 FGVLNNHSPS NVPSVQGQGL SLSLNTQILA PSLPYWSVKP DMLSPQSYHD SLRVDDIRMK 420 SMQSEASRAI RNSRYLKAAQ ELLDEVVNVW KNIKQKAQKE QGDAGKVDGK ETEGEPKSEG 480 VSSNPQESAA NTAPELSTAE KQELQNKMAK LMAMLDEVDR KYKHYYHQMQ TVVSSFDVVA 540 GPGAAKPYTA VALHTISRHF RCLKDAINDQ INVIRRKLGE EENSSGKEGK LTRLRYIDQQ 600 LRQQRAFQQY GMIPQNAWRP QRGLPENSVT ILRAWLFEHF LHPYPKDSEK LMLARQTGLT 660 RSQVDRKYKH YYHQMQTVVS SFDVVAGPGA AKPYTAVALH TISRHFRCLK DAINDQINVI 720 RKKLGEEENS SGKEGKLTRL RYIDQQLRQQ RAFQQYGIIP QNAWRPQRGL PENSVTILRA 780 WLFEHFLHPY PKDSEKLMLA RQTGLTRSQI SNWFINARVR LWKPMIEDMY KEEIGDIEQD 840 SNSSSDNAPR SKAEVASSED KEGLKSSTPR VCETSQLSES RASIGTVNVG GAPVGFQNEA 900 NPDESFMNLM LKDQRSNDTD GGLLLHNAVA HHPDENARFM AYHLAELGRY GNGNVSLTLG 960 LQHSSSSLSV PNAQQSFPGV GDDIYNATAP LGASVASSDY ESMNQMDQRQ RFEQSPLLHD 1020 FVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 2e-15 | 770 | 827 | 5 | 62 | Homeobox protein Meis2 |
3k2a_B | 2e-15 | 770 | 827 | 5 | 62 | Homeobox protein Meis2 |
4xrs_A | 1e-15 | 770 | 827 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 1e-15 | 770 | 827 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462932634 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805870.1 | 0.0 | BEL1-like homeodomain protein 7 | ||||
Swissprot | Q9SIW1 | 2e-96 | BLH7_ARATH; BEL1-like homeodomain protein 7 | ||||
TrEMBL | A0A3L6R7U0 | 0.0 | A0A3L6R7U0_PANMI; BEL1-like homeodomain protein 7 | ||||
STRING | Pavir.J04656.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP901 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16400.1 | 2e-84 | BEL1-like homeodomain 7 |
Publications ? help Back to Top | |||
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