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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462932187 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NAC |
| Protein Properties |
Length: 345aa MW: 39203.1 Da PI: 8.2805 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462932187 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.8 | 3e-51 | 36 | 164 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98
pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp + + ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+ +ge
462932187 36 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIKEMDIYKHDPWDLPkAGTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAanSGE 134
69***************************.89***************445556899*************************************9988889 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lv+y+g+a kg+ktdW+mhe+rl
462932187 135 SIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 164
9***************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005992 | Biological Process | trehalose biosynthetic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006561 | Biological Process | proline biosynthetic process |
| GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
| GO:0010120 | Biological Process | camalexin biosynthetic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MVAKEYARAA MSLDKVKSDG EALIAAGDGE EDDVVLPGFR FHPTDEELVT FYLRRKVARK 60
SLSIEIIKEM DIYKHDPWDL PKAGTVGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120
GIDRPIYSAA NSGESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPLAAAT ANASPCMQEA 180
EVWTICRIFK RNITYKRQQQ QPQQVWRQPP ADRNFQLPAE SSSNTGSFES DGGDEYMNRL 240
PGSAPAIPQH QHVSNQVNML HGVGSYFRDS VHSQKFQGQW FNSLPMTVYE QKPQVNPSAM 300
TIAFHQNNQS LATNEFYKDG YLDEIGRFME INDPTPTAFY DCKYA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-49 | 37 | 191 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-49 | 37 | 191 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-49 | 37 | 191 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-49 | 37 | 191 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-49 | 37 | 191 | 22 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-49 | 37 | 191 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-49 | 37 | 191 | 19 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK073539 | 1e-162 | AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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