PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462931157 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 399aa MW: 43533.5 Da PI: 7.5196 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.1 | 1.6e-07 | 71 | 119 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRK......kaeieeLeekvkeLeaeNkaLk 46 k +rr+++NReAAr+sR RK +a+ie+Le ++L + ++Lk 462931157 71 HKIQRRLAQNREAARKSRIRKkvvilsQAYIEQLEVSRAKLAQLEEELK 119 5889*****************5555555999999988777777776666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 68 | 122 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 75 | 90 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.3E-25 | 158 | 236 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
MATSTEVGRF CQPWAQFENW GDSGGIVVTS PLAETTSTDV DDSGDKQHNA QMGGGGGCAQ 60 RVDPSVVKGD HKIQRRLAQN REAARKSRIR KKVVILSQAY IEQLEVSRAK LAQLEEELKR 120 ARQQGMFIAS GCSGGEHGHS TSAFDAEYAR WLDEHQRHIN DLRAALSASG DGGATAELRA 180 AVDVVMSHHE HLAYRLKSAA TRADVFHVLS GMWLSPAERL FMWVGGHRPS EVLKAVVGGG 240 GGGMLELTER QLASVCGLQQ SSMEAEDALV TNYVGQMAMA MAKLGTLEHF VRQVRTRVSL 300 CDGERSITFT LVFIEPWRLC LICVAMCCVQ GDLLRQQTLQ EMRRTLNTRL LAAPGAQLPV 360 AGAPEGRLTG VTPTRCCTPT QHTTCGIVDH DSIGLRFYY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462931157 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010229877.2 | 1e-106 | transcription factor TGAL3 | ||||
Swissprot | Q5Z6N9 | 7e-95 | TGAL3_ORYSJ; Transcription factor TGAL3 | ||||
TrEMBL | A0A0A9BRJ3 | 1e-111 | A0A0A9BRJ3_ARUDO; Uncharacterized protein | ||||
STRING | BRADI1G43900.1 | 1e-106 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 3e-75 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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