PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462931157
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 399aa    MW: 43533.5 Da    PI: 7.5196
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462931157genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.11.6e-0771119446
                XCHHHCHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRK......kaeieeLeekvkeLeaeNkaLk 46 
                 k +rr+++NReAAr+sR RK      +a+ie+Le   ++L +  ++Lk
  462931157  71 HKIQRRLAQNREAARKSRIRKkvvilsQAYIEQLEVSRAKLAQLEEELK 119
                5889*****************5555555999999988777777776666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-668122No hitNo description
PROSITE patternPS0003607590IPR004827Basic-leucine zipper domain
PfamPF141444.3E-25158236IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MATSTEVGRF CQPWAQFENW GDSGGIVVTS PLAETTSTDV DDSGDKQHNA QMGGGGGCAQ  60
RVDPSVVKGD HKIQRRLAQN REAARKSRIR KKVVILSQAY IEQLEVSRAK LAQLEEELKR  120
ARQQGMFIAS GCSGGEHGHS TSAFDAEYAR WLDEHQRHIN DLRAALSASG DGGATAELRA  180
AVDVVMSHHE HLAYRLKSAA TRADVFHVLS GMWLSPAERL FMWVGGHRPS EVLKAVVGGG  240
GGGMLELTER QLASVCGLQQ SSMEAEDALV TNYVGQMAMA MAKLGTLEHF VRQVRTRVSL  300
CDGERSITFT LVFIEPWRLC LICVAMCCVQ GDLLRQQTLQ EMRRTLNTRL LAAPGAQLPV  360
AGAPEGRLTG VTPTRCCTPT QHTTCGIVDH DSIGLRFYY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462931157
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229877.21e-106transcription factor TGAL3
SwissprotQ5Z6N97e-95TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A0A9BRJ31e-111A0A0A9BRJ3_ARUDO; Uncharacterized protein
STRINGBRADI1G43900.11e-106(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.23e-75TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]