 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462925359 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 245aa MW: 27092.6 Da PI: 6.5345 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462925359 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 65.6 | 8.1e-21 | 180 | 221 | 1 | 41 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41
++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+++ s
462925359 180 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQIQPS 221
58***************************99********976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MGEVREENER LKKMLSRVTE DYQSLQMHFR EVLQQEQAKK LADTTTSLDT DIEEPGFVSL 60
RLGTSTSIHK KEAKSSIAEG NGREELMTIK EGGLTLGLSD CKVGATNSGK VQPNVLTLSP 120
EGSSEDAKDD AVETTDQWPP SKTLKNARDG DAEVEDDIGP LPQVKKARVS VRARCDAPTM 180
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAA GCPVRKQIQP SVLAVYEEFK TSKWLIGMDQ 240
QLANK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK248555 | 4e-45 | AK248555.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf78b10, mRNA sequence. |
