PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462924540
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 605aa    MW: 67173.2 Da    PI: 8.4166
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462924540genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.7e-1175103533
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                k  rr+++NReAAr+sR+RKka+i++Le 
  462924540  75 KTIRRLAQNREAARKSRLRKKAYIQQLES 103
                6789***********************96 PP
2bZIP_134.83.7e-11322350533
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                k  rr+++NReAAr+sR+RKka+i++Le 
  462924540 322 KTIRRLAQNREAARKSRLRKKAYIQQLES 350
                6789***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-671134IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-773114No hitNo description
PROSITE profilePS502178.9173117IPR004827Basic-leucine zipper domain
PfamPF001701.2E-875104IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-775109No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
PfamPF141444.7E-30154228IPR025422Transcription factor TGA like domain
SMARTSM003387.4E-6318381IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.91320364IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-7320361No hitNo description
PfamPF001701.2E-8322351IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-7322356No hitNo description
PROSITE patternPS000360325340IPR004827Basic-leucine zipper domain
PfamPF141444.7E-30401475IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MTRSLHTPKH EGSNVTADST DSESSSKNNS NYSSDQHGPA ANMASQFDQA SQQQPQHKNM  60
ATSSTHRTGK TLDPKTIRRL AQNREAARKS RLRKKAYIQQ LESSKVKLAQ MEQDIQRARA  120
HGLLLGGAPG ANTSSGAAMF DLEYARWLDD HGRHMAELRG ALQAHLQDGD LRAIVDDTLT  180
HHHELFRLKA MAAKSDVFHL ITGVWVSPAE RCFLWMGGFR PSDLLKTLLP LLDPLTEQQV  240
VGICNLQQSS QQAEEALSQG LEQLHQSLAT TMAGGSLTEE TDMSFMGQMA LALSKLSNLE  300
GFVIQNMATS STHRTGKTLD PKTIRRLAQN REAARKSRLR KKAYIQQLES SKVKLAQMEQ  360
DIQRARAHGL LLGGAPGANT SSGAAMFDLE YARWLDDHGR HMAELRGALQ AHLQDGDLRA  420
IVDDTLTHHH ELFRLKAMAA KSDVFHLITG VWVSPAERCF LWMGGFRPSD LLKTLLPLLD  480
PLTEQQVVGI CNLQQSSQQA EEALSQGLEQ LHQSLATTMA GGSLTEETDM SFMGQMALAL  540
SKLSNLEGFV IQLCHFQADN LRQQTLHQMH RILTVRQAAR CFLAIGEYHN RLRALSSLWA  600
SRPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462924540
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978700.10.0transcription factor TGAL4
SwissprotQ53Q701e-165TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A368S3T00.0A0A368S3T0_SETIT; Uncharacterized protein
STRINGPavir.Ha01753.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-112bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]