|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
462921758 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
Family |
B3 |
Protein Properties |
Length: 186aa MW: 20497.8 Da PI: 10.5065 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
462921758 | genome | Tef | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 95.8 | 2.9e-30 | 2 | 100 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
f+kv tpsdv+k++rlv+pk++ae+h +g + +++ l +ed g++W+++++y+++s++yvltkGW++Fvk++gL +gD v F+++
462921758 2 FDKVVTPSDVGKLNRLVIPKQHAEKHfplqlpviaaaavSG-ECKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSA- 99
89***************************999999988633.34889*************************************************543. PP
SE CS
B3 88 se 89
+
462921758 100 -G 100
.3 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MFDKVVTPSD VGKLNRLVIP KQHAEKHFPL QLPVIAAAAV SGECKGVLLN FEDAAGKVWR 60 FRYSYWNSSQ SYVLTKGWSR FVKEKGLHAG DAVGFYRSAG KQLFIDCKVR PRTTGAAAFL 120 NAAASPSTVK AVRLFGVDLV TTPTRPASAA PVQEDMMAMN KRPRDFIAAS TPHMFFKKQC 180 IDFALT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | FP099639 | 1e-104 | FP099639.1 Phyllostachys edulis cDNA clone: bphyem117o01, full insert sequence. |