 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462920619 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 292aa MW: 32101.9 Da PI: 4.9412 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462920619 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 34.4 | 3.8e-11 | 149 | 191 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N+++ Lr+++Pk + K++ +iL +++Y+k+L
462920619 149 MAERRRRKRLNDRLYMLRSIVPKiS------KMDRTSILGDTIDYVKEL 191
79*********************66......****************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MELDDDSTFL DELMWSSSAP WQAYPGGGMN YLSPPFQGHP PPLPHPHEEF NSFDCLSEVY 60
CNPYTSSSVA VPENPTAGGQ TLTPLHDAAT MAEEETNCDK GGGIFLSPTF VFGADVGQSS 120
EMAAASIRGG YGDAHHSSKV HGAPSKNLMA ERRRRKRLND RLYMLRSIVP KISKMDRTSI 180
LGDTIDYVKE LTERIKVLEE EIGASPEDMN LLNTLYDSSN NNNQMMVRNS TKFDVQKRGN 240
GSTRIEIFCP ANPGVLLSTV TALEEDGKRQ VISTDEIKQA LLKSAGYGGR YL
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 150 | 157 | ERRRRKRL |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
Development, 2016. 143(4): p. 682-90
[PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
Plant Mol. Biol., 2017. 93(3): p. 299-311
[PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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