PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462919998 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 332aa MW: 36803.4 Da PI: 9.3378 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 48 | 88 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L 462919998 48 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 88 788*************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-8 | 39 | 91 | No hit | No description |
SMART | SM00338 | 3.0E-9 | 44 | 107 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 46 | 90 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-7 | 48 | 88 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-7 | 48 | 91 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 51 | 66 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.6E-33 | 130 | 205 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MMADASPRTT DTSTDDTDEN HRLEPGQGAL AAASDSSDRS KDKPGDQKTL RRLAQNREAA 60 RKSRLRKKAY VQQLENSRLK LTQLEQELQR ARQQGIFISS SVDQTHSKSG NGALAFDMEY 120 ARWLEELNRQ ISELRAGVSA HAGDADLRSV VDKIMSHYDE IFKLKGNAAK ADVFHVLSGM 180 WKTPAERCFL WLGGFRPSEV LKLLSTQLEP LTEQQLSGIG NLQQSSQQAE DALSQGMEAL 240 QQSLAETLAG SLSSSGSTGN VANYMGQMAM AMGKLGTLEN FLRQADNLRL QTLQQLQRIL 300 TTRQSARAFL VISDYSSRLR ALSSLWLARP KE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462919998 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT036137 | 0.0 | BT036137.1 Zea mays full-length cDNA clone ZM_BFb0097M11 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002457410.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Refseq | XP_021312815.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Refseq | XP_021312816.1 | 0.0 | transcription factor TGA2.3 isoform X1 | ||||
Swissprot | P23923 | 0.0 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | C5XQR1 | 0.0 | C5XQR1_SORBI; Uncharacterized protein | ||||
STRING | Pavir.Ea01074.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP486 | 38 | 185 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.5 | 1e-125 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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