PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462916546 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | EIL | ||||||||
Protein Properties | Length: 173aa MW: 19954.1 Da PI: 9.8982 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 174.6 | 1.1e-53 | 38 | 154 | 1 | 117 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgak.ksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 e l +rmwkd+++lkr+ker++ l ++++++++ + + ++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raWWkekv 462916546 38 EQLARRMWKDRVRLKRIKERQQMLA-LQQVELEKSrQLKPVSDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAWWKEKV 136 6799*****************9866.5555555440445789********************************************************** PP XXXXXXXXXXXXXXXXXX CS EIN3 100 efdrngpaaiskyqaknl 117 +fd+ngpaai+ky+++n+ 462916546 137 KFDKNGPAAIAKYESENM 154 *************99885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.0E-53 | 38 | 154 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MEQLALIAAE LGDSSDFEVE GIQNLTENDV SDEEIEPEQL ARRMWKDRVR LKRIKERQQM 60 LALQQVELEK SRQLKPVSDQ AMRKKMSRAQ DGILKYMLKL MEVCNARGFV YGIIPDKGKP 120 VSGASDNIRA WWKEKVKFDK NGPAAIAKYE SENMGRKRSL VFVFHPSRIT ILT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462916546 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT062636 | 1e-129 | BT062636.1 Zea mays full-length cDNA clone ZM_BFb0325I05 mRNA, complete cds. | |||
GenBank | EU946895 | 1e-129 | EU946895.1 Zea mays clone 324672 mRNA sequence. | |||
GenBank | HQ858788 | 1e-129 | HQ858788.1 Zea mays clone UT1802 EIL transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004957192.1 | 6e-95 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_004957193.1 | 6e-95 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 4e-59 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | K3ZRM9 | 1e-93 | K3ZRM9_SETIT; Uncharacterized protein | ||||
STRING | Si029258m | 2e-94 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3720 | 37 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-61 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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