PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462915213 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 325aa MW: 35173.2 Da PI: 5.4816 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.8 | 3.1e-15 | 131 | 186 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+ rr+ +NRe+ArrsR+RK+ + Le v L+aeN +L k+l+ ++++++ 462915213 131 AKKKRRMLSNRESARRSRKRKQTHLNDLESQVSRLTAENASLLKRLDDMTQKYKDA 186 699****************************************9999998888755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.9E-18 | 125 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.588 | 130 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-13 | 131 | 184 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-12 | 132 | 184 | No hit | No description |
SuperFamily | SSF57959 | 5.06E-12 | 132 | 183 | No hit | No description |
CDD | cd14702 | 2.93E-18 | 133 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.3E-21 | 200 | 305 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MAGGAGDEVV EVSCGGGGGD PGAYAAVLKR KLDLYCAAVA KSMEARSQES SLGHPNSQAS 60 DISQLISQAS DTSQLISQAS FDGDGDRGSI FINSHVIDNT NCQGKPANSD TSKDQSDDDG 120 DLEESTDPIN AKKKRRMLSN RESARRSRKR KQTHLNDLES QVSRLTAENA SLLKRLDDMT 180 QKYKDATLDN RNLTVDVEMM RRKVNIAEEA VRRVTGASML LLPTKSDMPG RSRSMTSCAS 240 DAASAAVTIQ ESMQHFLQAP VQDDQIKLDL SNATFPLTSM DTGTRLAPLR RVTSLENLQK 300 RIHGDSVQSE TALLLLDPEA LASDK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 135 | KKKRR |
2 | 133 | 150 | KRRMLSNRESARRSRKRK |
3 | 144 | 150 | RRSRKRK |
4 | 144 | 151 | RRSRKRKQ |
5 | 146 | 151 | SRKRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462915213 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805357.1 | 1e-147 | light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2S3HFB1 | 1e-146 | A0A2S3HFB1_9POAL; Uncharacterized protein | ||||
STRING | Si022331m | 1e-145 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7595 | 29 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 3e-26 | bZIP family protein |