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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462914386 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NAC |
| Protein Properties |
Length: 545aa MW: 62103 Da PI: 8.4139 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462914386 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.1 | 1e-50 | 36 | 164 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98
pGfrFhPtdeelv++yL++kv++k+l++ e+i+e+diyk++PwdLp + + ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+ ++e
462914386 36 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIREMDIYKHDPWDLPkTGTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSSanSSE 134
69***************************.89***************445556889**************************************977788 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lv+y+g+a kg+ktdW+mhe+rl
462914386 135 SIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 164
8***************************98 PP
|
| 2 | NAM | 163.1 | 1e-50 | 236 | 364 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98
pGfrFhPtdeelv++yL++kv++k+l++ e+i+e+diyk++PwdLp + + ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+ ++e
462914386 236 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIREMDIYKHDPWDLPkTGTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSSanSSE 334
69***************************.89***************445556889**************************************977788 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lv+y+g+a kg+ktdW+mhe+rl
462914386 335 SIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 364
8***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MVAKEYAREA MSLDKVTSDG EALIAAGDGE EDDVVLPGFR FHPTDEELVT FYLRRKVARK 60
SLSIEIIREM DIYKHDPWDL PKTGTVGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120
GIDRPIYSSA NSSESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPVAAA ANASPCMQEA 180
EVWTICRIFK RNITYKRQQQ QPQQEYAREA MSLDKVTSDG EALIAAGDGE EDDVVLPGFR 240
FHPTDEELVT FYLRRKVARK SLSIEIIREM DIYKHDPWDL PKTGTVGGEK EWYFFCLRGR 300
KYRNSIRPNR VTGSGFWKAT GIDRPIYSSA NSSESIGLKK SLVYYRGSAG KGTKTDWMMH 360
EFRLPLAAAT ANASPCMQEA EVWTICRIFK RNITYKRQQQ QPQQVWRQPP ADRNFQLPAE 420
SSSNTGSFES DGGDEYMNRL PGSAPAIPQH QHVSNQVNML HGGGGFFRDS VHSQQFQGQW 480
FNSLPMTVHE QKPQVNPSAM TIAFHQSNQS LATNEFYKDG YLDEIARFME INDPTPTAFY 540
DCKYA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-46 | 37 | 391 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-46 | 37 | 391 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-46 | 37 | 391 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-46 | 37 | 391 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-46 | 37 | 391 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-46 | 37 | 391 | 19 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK073539 | 1e-150 | AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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