PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462914201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 250aa MW: 26967.8 Da PI: 5.8223 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.4 | 2e-15 | 131 | 186 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+ rr+ +NRe+ArrsR+RK+ + Le v L+aeN +L k+l+ ++++++ 462914201 131 AKKKRRMLSNRESARRSRKRKQTHLNDLESQVSRLTAENASLLKRLDDMTQKYKDA 186 699****************************************9999998888755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.9E-18 | 125 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.588 | 130 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-13 | 131 | 184 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-12 | 132 | 183 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.7E-13 | 132 | 184 | No hit | No description |
CDD | cd14702 | 4.21E-18 | 133 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 2.4E-11 | 200 | 250 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MAGGTGDEVV EVSCGGGGGD PGAYAAVLKR KLDLYCAAVA KSMEARSQES SFGHPNSQAS 60 DTSQLISQAS DTSQLISQAS FDGDGDRGSI FINSHVIDNT NCQGKQANSD TSKEQSDDDG 120 DLEESTDPIN AKKKRRMLSN RESARRSRKR KQTHLNDLES QVSRLTAENA SLLKRLDDMT 180 QKYKDATLDN RNLTVDVEMM RRKVDIAEEA VRRVTGASML LLPTKSDMPG RSRSMTSCAS 240 DAASAAVPIQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 135 | KKKRR |
2 | 133 | 150 | KRRMLSNRESARRSRKRK |
3 | 144 | 150 | RRSRKRK |
4 | 144 | 151 | RRSRKRKQ |
5 | 146 | 151 | SRKRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462914201 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805357.1 | 1e-112 | light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2S3HFB1 | 1e-111 | A0A2S3HFB1_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7EIZ5 | 1e-111 | A0A2T7EIZ5_9POAL; Uncharacterized protein | ||||
STRING | Si022331m | 1e-107 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7595 | 29 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 8e-27 | bZIP family protein |