PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462913436
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CAMTA
Protein Properties Length: 759aa    MW: 86214 Da    PI: 7.1402
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462913436genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1148.12.2e-46131173107
       CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101
                +e k+rwl ++e+++iL+n+e ++++++++++p+sgs++Lynr+++r fr+DGy+w+kkk+gk+++E+he+LKv++ evl+cyY+++++nptf+rr+yw+
  462913436  13 QEvKTRWLSPKEVLQILQNYEWFTISQKPAHKPPSGSWFLYNRRVLRLFRNDGYTWQKKKNGKSTNEAHERLKVDNAEVLSCYYSRGDQNPTFRRRIYWM 112
                6779************************************************************************************************ PP

       CG-1 102 Leeele 107
                L+   e
  462913436 113 LDPP-E 117
                *987.3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143762.8418134IPR005559CG-1 DNA-binding domain
SMARTSM010761.3E-5611158IPR005559CG-1 DNA-binding domain
PfamPF038593.7E-4115118IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.5E-7240307IPR014756Immunoglobulin E-set
SuperFamilySSF484031.34E-13426519IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.206.4E-14427520IPR020683Ankyrin repeat-containing domain
PfamPF136371.0E-7429479No hitNo description
PROSITE profilePS5029714.902430490IPR020683Ankyrin repeat-containing domain
CDDcd002045.64E-8430475No hitNo description
PROSITE profilePS5008810.099458490IPR002110Ankyrin repeat
SMARTSM00015210579601IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.522580609IPR000048IQ motif, EF-hand binding site
SMARTSM000151.4624646IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.888626654IPR000048IQ motif, EF-hand binding site
PfamPF006120.12626645IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0038647669IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.816648676IPR000048IQ motif, EF-hand binding site
PfamPF006120.0033649669IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    Send to blast
MQQQGFDINK LEQEVKTRWL SPKEVLQILQ NYEWFTISQK PAHKPPSGSW FLYNRRVLRL  60
FRNDGYTWQK KKNGKSTNEA HERLKVDNAE VLSCYYSRGD QNPTFRRRIY WMLDPPERLH  120
RFFHALGLLS HEGTMTISPS SLSWAYDHIV LVHYRDEEKA ALRKLKMQLS LEDKEDYDVD  180
TKEVLPNNEA ILVHGIQIGE PEDCTNLDDI FNVLEFSEDH TKEAGTHPFP SAIDIYENVT  240
QVIIVGDFLC STSESCAMMF GDVKVPVETV QQGVVRCHTP CLDHGKVRMY MVDVNGKPCS  300
EAREFEFLER PTKSMIDGNA KPCNEARVES DHKPTRSSDE LLLLLNYVQM LFNGHGCEQL  360
PKASLLLPNL DCSFQVNLIK ETDEQLDHES TINNVMEVLL TDKFEQWLLS KVEQSRDGDH  420
LLPKQYHCVI HMIAALGYEW ALKPLLSSGV PVNYRDSNGW TALHWAARFG REGTVAALLA  480
AGAAAGALSH PTSEDPAAKT PASIASAFGF SGLSAFLSEA QLISHLDSLE SKEKGNCNDG  540
ASGGGILCSV DRIWDKCTYV HGGTDDQLAL KDSLGAIRNA VQAAGRIQAA FRVFSFRKKQ  600
EMAHQNRNSC SLSINETVAV SHSIFEKAAL SIQKNFRCWK RRNEFVRMRK NVIKIQARVR  660
AHQERKKYRE LLRSVGVLEK LMLRWYKKGV GLRGFSSGAM PIDEEVEEDV VKLFRKQRVE  720
TAINEAVTRV SSIIDSPAAR QQYRRMLEIY QQAKDDSEK
Cis-element ? help Back to Top
SourceLink
PlantRegMap462913436
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971097.10.0calmodulin-binding transcription activator 4
TrEMBLA0A0A9AIS60.0A0A0A9AIS6_ARUDO; Uncharacterized protein
STRINGSi000282m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-100Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains