PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

462911439

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

G2-like

Protein Properties

Length: 191aa MW: 21380.5 Da PI: 5.2586

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462911439	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	67.6	2e-21	32	88	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmk...vkgLtlehvkSHLQkYRl 55 +r+ Wt +LH+ Fv+av+ GG++ A P +++++m+ v +Lt++++kSHLQkYR 462911439 32 KRMLWTDNLHKIFVKAVAYHGGPHAAKPNAVKQTMEaigVTSLTMHNIKSHLQKYRH 88 79************************99988775333889************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	9.14E-13	28	89	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.2E-20	30	89	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.2E-17	32	88	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MSNNKSSQYS VASYMSRILD PRMIRAMQPT RKRMLWTDNL HKIFVKAVAY HGGPHAAKPN 60 AVKQTMEAIG VTSLTMHNIK SHLQKYRHME KCGLGAGAAD NVPGTTSASK ADLMSEMMVD 120 TDAVMAEIEV VTQVNRFLMD DVEMVENNFS VDELQTMEEE LMAEVQLIQL NSQIPQTAVD 180 EYMDGLANYS M

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462911439

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015628276.1	2e-68	myb family transcription factor PHL12-like isoform X3
Refseq	XP_015628277.1	2e-68	myb family transcription factor PHL12-like isoform X3
TrEMBL	B8ANJ6	5e-67	B8ANJ6_ORYSI; Uncharacterized protein
TrEMBL	B9FA35	5e-67	B9FA35_ORYSJ; Uncharacterized protein
STRING	ORGLA03G0258500.1	2e-61	(Oryza glaberrima)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15499	12	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G06020.1	3e-14	G2-like family protein