 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462911290 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
Dof |
| Protein Properties |
Length: 229aa MW: 25300.6 Da PI: 8.8451 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462911290 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 101.8 | 4.3e-32 | 41 | 88 | 6 | 53 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGg 53
+cprCds ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnv G+
462911290 41 PSCPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVLGGA 88
68*****************************************96554 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MLSSHCENIM PLPYAAGRRA AVQLVDHHRR YRSPTAAEVA PSCPRCDSPN TKFCYYNNYS 60
LSQPRYFCKG CRRYWTKGGS LRNVLGGAVP PWLRHRQRRR RRAVLAPVPR RGRPAGPATG 120
RHDGFGHLSA PHCPDSRAEA LGELGFFSMD QSCYDSLGFP SSTDDGISGD LMLPSTWRHR 180
PAAKYELFDP LPEDAMGLHH DGGSIAGAVD DVWSHALACQ GLEAALCRP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT087262 | 3e-64 | BT087262.1 Zea mays full-length cDNA clone ZM_BFb0021J09 mRNA, complete cds. |
| GenBank | EU966549 | 3e-64 | EU966549.1 Zea mays clone 295206 dof domain, zinc finger family protein mRNA, complete cds. |
| GenBank | JX428477 | 3e-64 | JX428477.1 Zea mays subsp. mays clone pUT3073 DOF20 C2C2-DOF type transcription factor mRNA, partial cds. |
