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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462906609 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NF-YC |
| Protein Properties |
Length: 214aa MW: 24154.1 Da PI: 5.0968 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462906609 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 138.2 | 2.2e-43 | 89 | 185 | 2 | 95 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95
l +fw+ q i+++t+fkn +lPlarikki+kad dv++is eaP++++kace+fi eltlr w ha+enkrrtl+k+di++a++rt++fdf+v
462906609 89 LLAFWSGQlaeIQQTTKFKNYNLPLARIKKIMKADSDVQRISGEAPMVFAKACEMFIQELTLRGWHHAQENKRRTLQKNDITEAIARTEVFDFMVPS 185
5689*99988899********************************************************************************9855 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MRLRHWVAGC VFPFLSDWDQ IMVNEGVTNN DASEDQPSAS AAPSAGASLP TVIQDAPVCA 60
VIQPQLADEH QVASKQARQP HHDHQKQELL AFWSGQLAEI QQTTKFKNYN LPLARIKKIM 120
KADSDVQRIS GEAPMVFAKA CEMFIQELTL RGWHHAQENK RRTLQKNDIT EAIARTEVFD 180
FMVPSDEKKG MSVPPNTTVQ EDDDDPYANY YECN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Li S, et al.
HEAT-INDUCED TAS1 TARGET1 Mediates Thermotolerance via HEAT STRESS TRANSCRIPTION FACTOR A1a-Directed Pathways in Arabidopsis.
Plant Cell, 2014. 26(4): p. 1764-1780
[PMID:24728648] - Mei X, et al.
Identification and characterization of paternal-preferentially expressed gene NF-YC8 in maize endosperm.
Mol. Genet. Genomics, 2015. 290(5): p. 1819-31
[PMID:25851237] - Baud S, et al.
Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed.
Plant Physiol., 2016. 171(2): p. 1099-112
[PMID:27208266] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
Front Plant Sci, 2016. 7: p. 2045
[PMID:28119722]
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