 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462904540 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 336aa MW: 36358 Da PI: 4.6289 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462904540 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 37.1 | 5.5e-12 | 174 | 216 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
462904540 174 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVKEL 216
79*********************66......****************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MELDEETFLD ELMSLRREAS SSAPWQAYPV GGGGVMMSDL LFYGGGEGGA DTRSDMDLSP 60
FQGLVPVPAP PLPHPHEAEF NFDCLSEVCN PYRSSLAVPG GEPAAGGQTL TALHDAAMAE 120
EETSGDKGQY GGGVSPTFVF GGGAGQSSEM AGIRGYAGAH HRSKIHGAPS KNLMAERRRR 180
KRLNDRLSML RSIVPKISKM DRTSILGDTI DYVKELTERI KVLEQEIGAS PEDLNLLNTL 240
NDPSNNNSEM MVRNSTKFDV DRRGNGSTRI EICCPANPGV LLSTVSALEV LGLEIEQCVV 300
SCFSDFGMQA SCLQERFVQF YLVLELPYAP MANSRV
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 175 | 182 | ERRRRKRL |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU964715 | 1e-138 | EU964715.1 Zea mays clone 281052 DNA binding protein mRNA, complete cds. |
