PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462903533
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family BES1
Protein Properties Length: 856aa    MW: 95744 Da    PI: 4.8431
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462903533genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82292.21.2e-2844102260
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGw 60 
                g+g +++++E+E++k+RER+RRai+ +i+aGLR++Gny+l++raD+neV++AL+reAGw
  462903533  44 GGGGRRRAREKERTKLRERQRRAITGRILAGLRQHGNYNLRVRADINEVIAALAREAGW 102
                66778899*************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.9E-2745102IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514457.66E-187254698IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.804.6E-204257686IPR013781Glycoside hydrolase, catalytic domain
PfamPF013739.1E-113263677IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72294308IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72315333IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72337358IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060341349IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008424.5E-7420429IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.1E-72430452IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72503522IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72537553IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72554565IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.1E-72572595IPR001554Glycoside hydrolase, family 14
PRINTSPR008424.5E-7575585IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.1E-72609631IPR001554Glycoside hydrolase, family 14
PRINTSPR008424.5E-7660674IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008424.5E-7675689IPR001371Glycoside hydrolase, family 14B, plant
PfamPF013733.3E-25683839IPR001554Glycoside hydrolase, family 14
SuperFamilySSF514452.53E-54686852IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.803.5E-55687850IPR013781Glycoside hydrolase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 856 aa     Download sequence    Send to blast
MLGEEEDEEM GVKDEEDEDD DGEEDGCYFM AAAAGPGPVA QAAGGGGRRR AREKERTKLR  60
ERQRRAITGR ILAGLRQHGN YNLRVRADIN EVIAALAREA GWPAYRPVMV TAAPPCTPLA  120
FPTSPAPPLR GVAPVAARPI SHRPAPGALR SSSLLSPPCA AAAASRPADV PDDDEEDPSP  180
LLAVPVPMDP ATDGFVAKKV AEVAPRPPER DFAGTPYVPV YVMLPLNVVS ATGEVVDADE  240
LVPEVAPRPP ERDFAGTPYV PVYVMLPLNV VSATGEVVDA DELVGQLRVL KAAGVDGVMV  300
DCWWGIVEAN RPQEYNWTGY KRLFQMIREL KLKLQVVMSF HECGGNVGDD VNIPLPHWVT  360
EIGRSNPDIY FTDREGRRNT ECLSWGIDKE RVLQGRTAVE VYFDYMRSFR VEFDEYFEDG  420
IISEIEVGLG ACGELRYPSY PAKHGWKYPG IGEFQCYDRY LQKNLRKAAE ARGHTIWARG  480
PDNAGHYNSE PNQTGFFCDG GDYDSYYGRF FLNWYSQTLL DHADRVLMLA RLAFEGQNIA  540
VKVSGIHWWY KTASHAAELT AGFYNPCNRD GYAPIAAVLK KYDAALNFTC VELRTMDQHE  600
AYPEAFADPE GLVLNDAWDA GLQVASENAL PCYDREGFNK ILENAKPRND PDGRHLFGFT  660
YLRLSSVLFE RPNFFEFERF VKRMHDRVLM LARLAFEGQN IAVKVSGIHW WYKTASHAAE  720
LTAGFYNPCN RDGYAPIAAV LKKYDAALNF TCVELRTMDQ HEAYPEAFAD PEGLVLNDAW  780
DAGLQVASEN ALPCYDREGF NKILENAKPR NDPDGRHLFG FTYLRLSSVL FERPNFFEFE  840
RFVKRMHGEA VLDLQV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1bya_A1e-15725984911444BETA-AMYLASE
1byb_A1e-15725984911444BETA-AMYLASE
1byc_A1e-15725984911444BETA-AMYLASE
1byd_A1e-15725984911444BETA-AMYLASE
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462903533
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459849.20.0beta-amylase 2, chloroplastic
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLK3ZQS70.0K3ZQS7_SETIT; Beta-amylase
STRINGSi028957m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21413663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]