PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462903370 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 352aa MW: 37293.6 Da PI: 5.4027 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 67.9 | 1.7e-21 | 249 | 311 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++ 462903370 249 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIRKEYEQLLSQN 311 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 4.5E-28 | 1 | 97 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 1.4E-19 | 130 | 232 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.0E-17 | 245 | 310 | No hit | No description |
Pfam | PF00170 | 1.0E-19 | 249 | 311 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 7.2E-21 | 249 | 313 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.288 | 251 | 314 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.25E-10 | 252 | 309 | No hit | No description |
CDD | cd14702 | 9.02E-25 | 254 | 304 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 256 | 271 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MGSNDPSTPS KASKASEQDQ PPATTSGTTA SVYPEWPSFQ AYSAMPPHGF FPPPVAANPQ 60 AHPYMWGAQP IVPPYGTPPP PYVMYPPGTV YAHPSTPSGM HPFNHYPMPS NGNAEIPGAA 120 PSAPEMNGRS EPGRTSGPSA NGITSHSESG SDSESDGSDA NSQNDSHSKE NGGKEDGSSQ 180 NGTSYSASQG MVNQAMSMLP VQPGAMVGVP GSTSNLNIGV DYWAAPGSAA VPAMHGKAPA 240 GSARDQWDER ELKKQKRKQS NRESARRSRL RKQAECEELG QRAESLRSEN SSLRAELERI 300 RKEYEQLLSQ NASLKGRLGG TSDSVPDMNE QNDGDGISKK QPDYDAQPGS EP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 271 | RRSRLRK |
2 | 265 | 272 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462903370 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004952026.1 | 0.0 | transcription factor HBP-1a | ||||
Swissprot | P23922 | 1e-145 | HBP1A_WHEAT; Transcription factor HBP-1a | ||||
TrEMBL | K3YTP1 | 0.0 | K3YTP1_SETIT; Uncharacterized protein | ||||
STRING | Si017637m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2147 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32150.1 | 2e-66 | basic region/leucine zipper transcription factor 68 |
Publications ? help Back to Top | |||
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