 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462902819 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 230aa MW: 25141.2 Da PI: 7.4553 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462902819 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 45.7 | 1.1e-14 | 120 | 170 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+rr+h ++Er+RR+++N+ ++ Lr+++P++ ++++ + a+i+ A++Y+k++
462902819 120 QRRNHIAVERNRRRQMNEYLAVLRSVMPPS---YAQRGDQASIVAGAINYVKEM 170
79****************************...*******************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MALEAVVFSQ EHLTCTAKMA VAAHSESPSC GIDIDEFEDK GGVVLQEDQA DALLLHGVGA 60
ATTWDAAALC RPCSIAPGAV EERWDVVENR SVSPAPAPVA SRRRRRRPKA VKNKEEVENQ 120
RRNHIAVERN RRRQMNEYLA VLRSVMPPSY AQRGDQASIV AGAINYVKEM EQLLQSLEAQ 180
KRSVQRPEQL AAAPPFAGFF TFPQYSTGAT GVPGDSSDNG GDVQRRATRT
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 101 | 106 | RRRRRR |
| 2 | 121 | 131 | RNHIAVERNRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT060512 | 4e-94 | BT060512.1 Zea mays full-length cDNA clone ZM_BFb0009D23 mRNA, complete cds. |
| GenBank | EU966002 | 4e-94 | EU966002.1 Zea mays clone 290696 mRNA sequence. |
