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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
462899814 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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| Family |
G2-like |
| Protein Properties |
Length: 311aa MW: 33738.2 Da PI: 6.7918 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462899814 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 41.9 | 2.3e-13 | 37 | 64 | 1 | 28 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28
kprlrWt eLHerFv+av+qLGG++ A
462899814 37 KPRLRWTVELHERFVDAVTQLGGPDTAA 64
79***********************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MFPSKKATSA AAAAVSSNDR GMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP 60
DTAAMEMQRN AASSSGMMGR GINDRNHMNE AIRMQMEVQR RLHEQLEVQK HLQIRIEAQG 120
KYMQNILQKA YQTIASGDVV SCPAGYKSLG NQGILDVCSL KDMGPSMGFP SLQDLHMYGG 180
GHLDLHQQMD RPMDSFFACS DGSIGSLGKK RPNPYAATGK SPMMWGDDEQ GKLSDHLQMA 240
PPMIDAGIDV MDSIADVYGD AKSMMSGDSS AGSKGFDGKL ERPSPRRPHM GGERMDSPSV 300
MGGQTRNMSY G
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor required for phloem identity. Has a dual role both in promoting phloem differentiation and in repressing xylem differentiation during vascular development. Regulates the expression of the transcription factor NAC045 (AC A4VCM0). May activate the transcription of specific genes involved in phosphate uptake or assimilation (PubMed:15592750). Promotes flowering through transcriptional activation of both FT and its transport machinery component, FTIP1 (PubMed:26239308). {ECO:0000269|PubMed:14614507, ECO:0000269|PubMed:18523061, ECO:0000269|PubMed:25081480, ECO:0000269|PubMed:26239308, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by phosphate deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK119588 | 5e-45 | AK119588.1 Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence. |
| GenBank | AP003628 | 5e-45 | AP003628.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0473H04. |
| GenBank | AP014962 | 5e-45 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012614 | 5e-45 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
| GenBank | CT841760 | 5e-45 | CT841760.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C103B02, full insert sequence. |
| Publications
? help Back to Top |
- Martínez-Navarro AC,Galván-Gordillo SV,Xoconostle-Cázares B,Ruiz-Medrano R
Vascular gene expression: a hypothesis.
Front Plant Sci, 2013. 4: p. 261
[PMID:23882276] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Kondo Y, et al.
Vascular Cell Induction Culture System Using Arabidopsis Leaves (VISUAL) Reveals the Sequential Differentiation of Sieve Element-Like Cells.
Plant Cell, 2016. 28(6): p. 1250-62
[PMID:27194709] - Shibuta M,Abe M
FE Controls the Transcription of Downstream Flowering Regulators Through Two Distinct Mechanisms in Leaf Phloem Companion Cells.
Plant Cell Physiol., 2017. 58(11): p. 2017-2025
[PMID:29036620]
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