PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462897485
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 374aa    MW: 40216.4 Da    PI: 9.8816
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462897485genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.55e-17290343154
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                e+elk+++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l++
  462897485 290 ERELKKQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQE 343
                89*************************************************975 PP
2bZIP_121.84.2e-073353652555
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                k+e+++L+ekv++L++eN++L ++l+el++e
  462897485 335 KEELKQLQEKVDSLTSENTSLHEKLKELEDE 365
                799*************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.2E-291101IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-17140259No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-14285348No hitNo description
PfamPF001703.7E-16290345IPR004827Basic-leucine zipper domain
SMARTSM003381.3E-19290354IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.771292355IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.13E-9293349No hitNo description
CDDcd147025.99E-21295346No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
PfamPF165593.0E-6326357IPR032352Arf GTPase-activating protein GIT1/2, coiled-coil domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGKGDVTTRS KSQKTSAVQN EQSTPTNPPT AYPDWSQFQA YYNAAGTAPM TPPAFFHSPV  60
APSPQGHPYM WGPQMMPPYG TPPPYAAMYA QGTPYQQTSM PPGSHPYNPY PGLSPNGTVQ  120
TPKSGAGATE TDKSSKTKRK TPLKRSKGSL GSLDVVTAKN NKSPAKPSAS SSNEGSSQSE  180
SGSGSSSEGS STNSKSGSRV KGGSEHGQST QGSAVEPTQP SSGPVVLNPM MPFWPVHPPM  240
AGPATTVNMG GDYWGAPTSV PMHSKMIAAP TSAPSSNSRD VLSDPAIQDE RELKKQKRKQ  300
SNRESARRSR LRKQAEWEEV ANRADLLKQE NSSLKEELKQ LQEKVDSLTS ENTSLHEKLK  360
ELEDEKSNGN WYKY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306312RRSRLRK
2306313RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462897485
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985057.10.0bZIP transcription factor 16
RefseqXP_022678888.10.0bZIP transcription factor 16
SwissprotQ501B21e-86BZP16_ARATH; bZIP transcription factor 16
TrEMBLK4AMZ00.0K4AMZ0_SETIT; Uncharacterized protein
STRINGPavir.Ib00998.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-58basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]