PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462894297
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 471aa    MW: 52299 Da    PI: 6.826
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462894297genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.4e-12160190333
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                ++k err+++NReAAr+sR+RKka++++Le+
  462894297 160 DDKMERRLAQNREAARKSRLRKKAYVQQLET 190
                5899*************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-6158234IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-7160204No hitNo description
PROSITE profilePS502179.094160204IPR004827Basic-leucine zipper domain
PfamPF001702.5E-8161190IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-7161203No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
PfamPF141441.2E-30242317IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MPKASILELQ PAATACFGEL EKALIHGSRT AVDPSMIGSD VHANTAGYLA ARPPTLEIFP  60
SWPMSHLQQP YSGNSQSVGS TSGSSSGQNT MPQAAELVSP LSTGADSGHQ QEALMVTVDD  120
YNYGQGLGAT ADTAPIFQQH TAGQDKRKHR STRKDGRLLD DKMERRLAQN REAARKSRLR  180
KKAYVQQLET CRIRLQQIEQ ELHRPCSQGL FQGGCSGPGD MSSGAIMFDM EYARWLDDES  240
KHLTELRAAL HAQLIDANLG VIVEDCMRHY DELFHLRAVL ARSDVFHLMT GMWATSAERC  300
FLWMGGFRPS EILKMLIPQL DPLTEQQLLG MCNLQQSSEQ AEEALVQGLQ QLHQSLADAV  360
GAGPLNDGAS VANYTGLMGL ALDRLDSLES FYRQADNLRQ QALRYMRRIL TTRQTARCFL  420
SIGEYHRRLR ALSSAWTCRP RENSAATENV SPTGTEHLMQ QQYHQSQFSG F
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462894297
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961926.10.0transcription factor TGAL5 isoform X1
RefseqXP_022680634.10.0transcription factor TGAL5 isoform X1
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A368QHY50.0A0A368QHY5_SETIT; Uncharacterized protein
STRINGTraes_1AL_3B659AABA.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-128bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]