PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462894297 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 471aa MW: 52299 Da PI: 6.826 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.7 | 4.4e-12 | 160 | 190 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 ++k err+++NReAAr+sR+RKka++++Le+ 462894297 160 DDKMERRLAQNREAARKSRLRKKAYVQQLET 190 5899*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-6 | 158 | 234 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 160 | 204 | No hit | No description |
PROSITE profile | PS50217 | 9.094 | 160 | 204 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-8 | 161 | 190 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.19E-7 | 161 | 203 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 165 | 180 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.2E-30 | 242 | 317 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MPKASILELQ PAATACFGEL EKALIHGSRT AVDPSMIGSD VHANTAGYLA ARPPTLEIFP 60 SWPMSHLQQP YSGNSQSVGS TSGSSSGQNT MPQAAELVSP LSTGADSGHQ QEALMVTVDD 120 YNYGQGLGAT ADTAPIFQQH TAGQDKRKHR STRKDGRLLD DKMERRLAQN REAARKSRLR 180 KKAYVQQLET CRIRLQQIEQ ELHRPCSQGL FQGGCSGPGD MSSGAIMFDM EYARWLDDES 240 KHLTELRAAL HAQLIDANLG VIVEDCMRHY DELFHLRAVL ARSDVFHLMT GMWATSAERC 300 FLWMGGFRPS EILKMLIPQL DPLTEQQLLG MCNLQQSSEQ AEEALVQGLQ QLHQSLADAV 360 GAGPLNDGAS VANYTGLMGL ALDRLDSLES FYRQADNLRQ QALRYMRRIL TTRQTARCFL 420 SIGEYHRRLR ALSSAWTCRP RENSAATENV SPTGTEHLMQ QQYHQSQFSG F |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462894297 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961926.1 | 0.0 | transcription factor TGAL5 isoform X1 | ||||
Refseq | XP_022680634.1 | 0.0 | transcription factor TGAL5 isoform X1 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A368QHY5 | 0.0 | A0A368QHY5_SETIT; Uncharacterized protein | ||||
STRING | Traes_1AL_3B659AABA.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3809 | 31 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-128 | bZIP family protein |
Publications ? help Back to Top | |||
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