 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462894193 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NF-YC |
| Protein Properties |
Length: 323aa MW: 35816 Da PI: 6.522 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462894193 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 52.4 | 1.2e-16 | 45 | 119 | 24 | 98 |
NF-YC 24 arikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
rikki++adedv +i+ +Pvl+ska elf+ +l r++ + + +t+ s +++++ +++dfl ++v +
462894193 45 PRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYDITIRKGAKTVSSSHLKQCIHTYNVYDFLREVVSK 119
59********************************************************************99976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MRKKLDTRFP ANRFSFMHVR NFGCLMIGGY AVDLSSRSVE NPGTPRIKKI MQADEDVGKI 60
ALAVPVLVSK ALELFLQDLC DRTYDITIRK GAKTVSSSHL KQCIHTYNVY DFLREVVSKV 120
PDMGTADANA DDKFGKRKAA EEGSEEELKR TRNESERHTS NGRGRGRGRG RGRRGGRGSW 180
REFSTTHEKS NDQFSKPADL KLEVSDATEG EGTPMSSGRA CLRNFDLNLD PADEDVEVAV 240
PLQTQSTAST TSLSTVTGPS VHQLNEGATT AKPSAPRSIE GPKLKDFLGW QLPDMTKMTM 300
DPIHFALTSN HTLEDDEDYD NEE
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 162 | 171 | RGRGRGRGRG |
| 2 | 162 | 172 | RGRGRGRGRGR |
