PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462891797
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family WRKY
Protein Properties Length: 351aa    MW: 36054.6 Da    PI: 9.075
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462891797genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.46e-28141199259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+kk++r+a+d +v++ tY g Hnh+
  462891797 141 NDGCQWRKYGQKVAKGNPCPRAYYRCTGApDCPVRKKLQRCAHDASVLISTYDGVHNHP 199
                8**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-28128199IPR003657WRKY domain
SuperFamilySSF1182901.44E-24134200IPR003657WRKY domain
PROSITE profilePS5081125.913135201IPR003657WRKY domain
SMARTSM007742.6E-32140200IPR003657WRKY domain
PfamPF031069.6E-24141199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MAKDDCRSIG NEGEEEYQKA RLKRIGAESE LRRDEPAAPF LSLRLGTVSA IGTTSRKRGE  60
VTCATARAQA GDASPISLGL ALGLRSYDDG EPVGAAAAAG TKRQRTGDSS RDDSASGDKN  120
APPARPGRVS FRARCSAATI NDGCQWRKYG QKVAKGNPCP RAYYRCTGAP DCPVRKKLQR  180
CAHDASVLIS TYDGVHNHPL TPYAAAMAEA MAASAAASSS SSSSSSSQMG AAYGATASRV  240
AEDDAPLTAV PVAMRPPLPK DDAPLLAVPV AMRPPPPQSY FASGSSAVAI SGSGAAPPTA  300
SLGRNNPMAG VVEKAVADPK FRAAVMAAVA SYVSEQCGGK IGDLLTMAPP S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-201402021475WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462891797
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818819.11e-87probable WRKY transcription factor 47 isoform X2
TrEMBLA0A2T8ILB73e-86A0A2T8ILB7_9POAL; Uncharacterized protein
STRINGSi002295m6e-86(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143192226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-40WRKY DNA-binding protein 9