PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462891452 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 229aa MW: 24615.2 Da PI: 5.1646 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.1 | 5.1e-15 | 98 | 152 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK+a++ +L + L+aeN +L k+l +++++ 462891452 98 SSKRLRRLLSNRESARRSRKRKQAQLNNLHSQISLLTAENASLLKRLADVTQKYK 152 68******************************************99988888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-13 | 92 | 152 | No hit | No description |
SMART | SM00338 | 7.2E-14 | 96 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 98 | 161 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-12 | 99 | 152 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-10 | 100 | 151 | No hit | No description |
CDD | cd14702 | 1.04E-15 | 101 | 151 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 103 | 118 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 4.3E-14 | 160 | 214 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MADSSADEAV DAGGGQTSDP GAYAADLKRK LDLYCAAVAK TMEAKTQESS LDFSDSQASG 60 TSQLIFQASL DANIGTSKEQ SNDDGDLEEI TDPTDSTSSK RLRRLLSNRE SARRSRKRKQ 120 AQLNNLHSQI SLLTAENASL LKRLADVTQK YKEAAIDIQT MQRKVHIAEE AVRRVTGASM 180 LSPTTSDMLG SGVPFNSYLS DAASAAVPVE ESMQRSPRAI ASARDPDRA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | RRSRKRK |
2 | 112 | 119 | RRSRKRKQ |
3 | 114 | 119 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462891452 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020183207.1 | 3e-74 | light-inducible protein CPRF2-like isoform X1 | ||||
Swissprot | Q7X9A8 | 1e-21 | RSBZ2_ORYSJ; bZIP transcription factor RISBZ2 | ||||
TrEMBL | M8A8C4 | 5e-75 | M8A8C4_TRIUA; Light-inducible protein CPRF2 | ||||
STRING | TRIUR3_15470-P1 | 9e-76 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7595 | 29 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 3e-17 | basic leucine zipper 25 |
Publications ? help Back to Top | |||
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