 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462889249 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
G2-like |
| Protein Properties |
Length: 268aa MW: 29007 Da PI: 6.2408 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462889249 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 88.3 | 7e-28 | 3 | 53 | 5 | 55 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+Wt +LHerFv+av++LGG++kAtPk++l++m v+gLtl+h+kSHLQk+Rl
462889249 3 KWTRQLHERFVRAVSELGGADKATPKSVLRAMAVPGLTLHHLKSHLQKHRL 53
7*************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MQKWTRQLHE RFVRAVSELG GADKATPKSV LRAMAVPGLT LHHLKSHLQK HRLAVSRGLD 60
ASPADNGDRS SSSETESQPD EYVEDTVTGL YLTFAGDDGD SAPKEALCDS SRSVAWMQRE 120
VQRNLQEQIE VQRHLQLRIQ AQGRYLQSVL RRAQEVLADH SLGSPEAAMA ELSELASAAA 180
STSSSLSLSP PRHRSADSCV TSSSSSKAES KAGAKRLCTS CADTRECTVE QPVSQSKRAV 240
LQSHGQQQGG AEEEADAENG SSEIDLNR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 4e-15 | 3 | 54 | 5 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-15 | 3 | 54 | 5 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-15 | 3 | 54 | 5 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-15 | 3 | 54 | 5 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-15 | 3 | 57 | 6 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT060918 | 7e-50 | BT060918.2 Zea mays full-length cDNA clone ZM_BFb0071B24 mRNA, complete cds. |
| GenBank | BT064604 | 7e-50 | BT064604.1 Zea mays full-length cDNA clone ZM_BFc0189E19 mRNA, complete cds. |
| GenBank | FP095207 | 7e-50 | FP095207.1 Phyllostachys edulis cDNA clone: bphyem201h10, full insert sequence. |
| GenBank | JX469988 | 7e-50 | JX469988.1 Zea mays subsp. mays clone UT3348 G2-like transcription factor mRNA, partial cds. |
