PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

462888938

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

G2-like

Protein Properties

Length: 407aa MW: 44475.5 Da PI: 7.3582

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462888938	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	44.4	3.7e-14	55	86	25	56
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56 ++A+P +i+e m+v+g+t++hv+SHLQkYR++ 462888938 55 KEAVPNKIVEQMNVEGITRDHVASHLQKYRMH 86 78****************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.2E-13	48	89	IPR009057	Homeodomain-like
SuperFamily	SSF46689	9.5E-7	52	89	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.3E-12	55	86	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
MIYPSSAHAT AAAVTTTVAA VEPVGERPER RQYFKIHNYL FIMLSANDKL ETMMKEAVPN 60 KIVEQMNVEG ITRDHVASHL QKYRMHLKQV STGTYKSRNP FTNENVLSEG NFINTDGQHG 120 RYQPSISFAC FSAASGTHNM LPTQSVQLMN QRNLVISSKD MGSVGYGGNL SQIVVPRSQH 180 GVSSFTSASN SNTNICFLSG SSGSSFTNIS NNTTFNTSNS SANIRKGRSP LAVSMEATYY 240 PYISYASLCM SDPDPSKRNK RRLNQLSSLA ALSGPNSEFQ KQVATLTRTT TPMAGFTEQV 300 APFKIGNNTN SVVMPNYNSA PGGASSVISD LPSIQTYRDA MQSQMLNVRD GSGSLLDHQV 360 VADELNYNNE SLIGTRSGQN GLGDDLDEFL TDCFDQHQDV QLDHKLQ

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

MIYPSSAHAT AAAVTTTVAA VEPVGERPER RQYFKIHNYL FIMLSANDKL ETMMKEAVPN  60
KIVEQMNVEG ITRDHVASHL QKYRMHLKQV STGTYKSRNP FTNENVLSEG NFINTDGQHG  120
RYQPSISFAC FSAASGTHNM LPTQSVQLMN QRNLVISSKD MGSVGYGGNL SQIVVPRSQH  180
GVSSFTSASN SNTNICFLSG SSGSSFTNIS NNTTFNTSNS SANIRKGRSP LAVSMEATYY  240
PYISYASLCM SDPDPSKRNK RRLNQLSSLA ALSGPNSEFQ KQVATLTRTT TPMAGFTEQV  300
APFKIGNNTN SVVMPNYNSA PGGASSVISD LPSIQTYRDA MQSQMLNVRD GSGSLLDHQV  360
VADELNYNNE SLIGTRSGQN GLGDDLDEFL TDCFDQHQDV QLDHKLQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462888938

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18722	4	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	2e-10	G2-like family protein