PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

TALE

Protein Properties

Length: 241aa MW: 26687.5 Da PI: 11.5815

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462888523	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	182	219	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + 462888523 182 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 219 665559******************************98 PP
2	BELL	35.9	1.9e-12	21	54	39	72
BELL 39 avaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +vag +++ Yt+lA+++iSrhFr+L+d i+ q+ 462888523 21 TVAGDRASAAYTALASRTISRHFRNLRDGIVAQL 54 79999**************************996 PP
3	BELL	35.4	2.6e-12	81	114	39	72
BELL 39 avaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +vag +++ Yt+lA+++iSrhFr+L+d i+ q+ 462888523 81 TVAGDRASAAYTALASRTISRHFRNLRDGIVAQL 114 699999*************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07526	2.1E-8	21	50	IPR006563	POX domain
Pfam	PF07526	1.5E-8	81	110	IPR006563	POX domain
PROSITE profile	PS50071	11.953	160	223	IPR001356	Homeobox domain
SMART	SM00389	6.6E-9	163	227	IPR001356	Homeobox domain
CDD	cd00086	1.25E-11	163	224	No hit	No description
SuperFamily	SSF46689	4.23E-18	164	232	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.9E-28	166	228	IPR009057	Homeodomain-like
Pfam	PF05920	2.2E-18	180	219	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MAHDPSLGFA DYFSAADATA TVAGDRASAA YTALASRTIS RHFRNLRDGI VAQLQGVRKA 60 LGEKDVSMPG MTRGETPRLR TVAGDRASAA YTALASRTIS RHFRNLRDGI VAQLQGVRKA 120 LGEKDVSMPG MTRGETPRLR VLDQCIRQQK ALNQAGLMET HPWRPQRGLP ERAVTILRAW 180 LFEHFLHPYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMAS RTAAGSISSR 240 A

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3k2a_A	3e-17	169	227	5	63	Homeobox protein Meis2
3k2a_B	3e-17	169	227	5	63	Homeobox protein Meis2
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269\|PubMed:12244239, ECO:0000269\|PubMed:17693535, ECO:0000269\|PubMed:22786869}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462888523

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU957962	1e-148	EU957962.1 Zea mays clone 1638491 BEL1-related homeotic protein 14 mRNA, complete cds.
GenBank	EU957980	1e-148	EU957980.1 Zea mays clone 1639087 BEL1-related homeotic protein 14 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020184600.1	4e-88	homeobox protein BEL1 homolog
Refseq	XP_020184605.1	4e-88	homeobox protein BEL1 homolog
Refseq	XP_020184610.1	4e-88	homeobox protein BEL1 homolog
Refseq	XP_020184619.1	4e-88	homeobox protein BEL1 homolog
Swissprot	Q38897	4e-70	BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBL	A0A0A9GPR1	6e-93	A0A0A9GPR1_ARUDO; Uncharacterized protein
STRING	MLOC_62535.2	5e-89	(Hordeum vulgare)
STRING	Traes_4BL_0F02B2343.1	2e-87	(Triticum aestivum)
STRING	TRIUR3_26361-P1	3e-91	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3814	37	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	2e-72	TALE family protein

Publications ? help Back to Top
Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules. Development, 2016. 143(3): p. 422-6 [PMID:26700684] Lozano-Sotomayor P, et al. Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana. Plant J., 2016. 88(3): p. 437-451 [PMID:27402171]