 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462887900 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 403aa MW: 43238 Da PI: 9.1157 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462887900 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 37.1 | 5.8e-12 | 220 | 266 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h+e+ErrRR+riN +++Lr ++P K++Ka+ L +++ ++k+L
462887900 220 KNHSEAERRRRERINAHLATLRGMVPCT-----DKMDKAALLAEVITHVKKL 266
58*************************7.....6****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MALLFVVLGN QGVGVAAVCL LASSCLSLRV LGLGLATFWF WRRVLGPCEC KFLGARAACL 60
VPAELLLIPR KKKRLLLKLH FLVVKETLSS GLDLHIYASR LLSVACQLAL ILGSVFLTQN 120
FLHRKTVVAR TVMPLCLADH RRRGILLNGN MSSAPLSSDS SGLYAGFGDG HCHDLQDLSQ 180
VLGASSTSPD VVSNGNAQEL DAAAAKEVGK RKGDRAESLK NHSEAERRRR ERINAHLATL 240
RGMVPCTDKM DKAALLAEVI THVKKLKTNA ARISQHCPVP ADADEVTVEL VHDASSHDGG 300
GVLVKATLSC DDGADIFADV KDALRPLRLR VVGSEVTTLG GRVRFTFLMS SCAGGDDVSE 360
GAVHQALQSV LDKANNALEF APRASLLNKR RRFSTFESSS SSS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 68 | 74 | PRKKKRL |
| 2 | 209 | 229 | KRKGDRAESLKNHSEAERRRR |
| 3 | 225 | 230 | ERRRRE |
