 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462884741 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 249aa MW: 26479.6 Da PI: 7.9675 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462884741 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 91.1 | 8.6e-29 | 85 | 144 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv++saed +v++ tYegeH+h+
462884741 85 VKDGYQWRKYGQKVTRDNPSPRAYFRCAYApSCPVKKKVQKSAEDSSVLVATYEGEHTHP 144
58***************************99****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MEADAEPDRK AGARATSSSM TDEERERAES PERSNSSDGG NRKCADADRA EPPPPTLSDG 60
AASCKRIKVS RVCTRIDPAD TMLTVKDGYQ WRKYGQKVTR DNPSPRAYFR CAYAPSCPVK 120
KKVQKSAEDS SVLVATYEGE HTHPCPTRAG ELLPGGVATR SGSVPCSISI NSSSSGPTIT 180
LDLTKNGAGG GGVRVLGADQ APDLKKLCRE IASPEFRTAL VEQMASVLTS NTDFTGALAA 240
AILRQLPEY
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT035304 | 6e-87 | BT035304.1 Zea mays full-length cDNA clone ZM_BFb0054B07 mRNA, complete cds. |
| GenBank | BT068493 | 6e-87 | BT068493.1 Zea mays full-length cDNA clone ZM_BFb0234B18 mRNA, complete cds. |
| GenBank | EU518772 | 6e-87 | EU518772.1 Zea mays WRKY DNA-binding protein (WRKY) mRNA, complete cds. |
| GenBank | KJ726810 | 6e-87 | KJ726810.1 Zea mays clone pUT3166 WRKY transcription factor (WRKY53) mRNA, partial cds. |
