 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462884619 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 260aa MW: 29004.2 Da PI: 4.5902 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462884619 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.2 | 1.2e-17 | 48 | 101 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++t+eq+++Le Fe+ + + e++ eLA++lg+ rqV vWFqNrRa+++
462884619 48 KRRLTAEQVRALELSFEEeKLRLEPERKSELARRLGIAPRQVAVWFQNRRARWR 101
5689*************97899*******************************9 PP
|
| 2 | HD-ZIP_I/II | 118.3 | 4.3e-38 | 48 | 139 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
krrl++eqv++LE sFeee+ +LeperK+elar+Lg+ prqvavWFqnrRAR+++kqlE+d+++L++a+d+l + +++L +++++Lr+++++
462884619 48 KRRLTAEQVRALELSFEEEKlRLEPERKSELARRLGIAPRQVAVWFQNRRARWRAKQLEQDFDRLRAAHDELLAGRDALLADNDRLRSQVTT 139
9***************************************************************************************9975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MPVENGRRKR PFLTAHELEL GGVDMDDVDQ LCGYEYELHG APERSSAKRR LTAEQVRALE 60
LSFEEEKLRL EPERKSELAR RLGIAPRQVA VWFQNRRARW RAKQLEQDFD RLRAAHDELL 120
AGRDALLADN DRLRSQVTTL TEKLQGKEPA ALQPEEQQTT PSAATDTTAS MQAAVVFVQL 180
DEDQLRETTG CAVPAQGFAV RANSDSPESY FAGAPSPPSS SEGDCSEEGS ALLFPDAMLL 240
AAVEHGRGHA GEDSWEWFWN
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK356850 | 7e-96 | AK356850.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1041A16. |
