 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462884101 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
Nin-like |
| Protein Properties |
Length: 396aa MW: 43103.5 Da PI: 5.2552 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462884101 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 87 | 1.6e-27 | 174 | 223 | 2 | 51 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51
ek++sle+l++yFs+ +kdAA++Lgvc+T++KriCRq+GI+RWP+R+i++
462884101 174 EKTVSLEELQQYFSGRMKDAARSLGVCPTTMKRICRQHGISRWPFRQIAK 223
799*********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MDAYPLAHHA RFCGLAGCLA VCVEMRRDAN EGGREECVLE FFLPPDCRDG AAQKAAVEAM 60
AGTLAERFGN GDLKAIAICS LQDLAFEVVE DDECVLRPDP TIMADTPELE LDDYGGYERD 120
SEEADEHPAA AVGSADVEEP KTDNGEGEQK EGEDPKPRVG RRRKKKKIGK RKNEKTVSLE 180
ELQQYFSGRM KDAARSLGVC PTTMKRICRQ HGISRWPFRQ IAKANNSLDK VKRIFESVQY 240
SPNPVAASAS QQAPAPATAH HPPAALPCLS SAPGVASSQG SCQEPPPRRN TTIRKPFHAV 300
NAGVVTIKAS YRRDIVRFRV PSSAGVEAVK GEVAKRLNME TDAFDVKYLD DDNEWVLLSC 360
DADFQECLEV VPALSTTSSS SGSGAAQPVV RLMVQE
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 160 | 166 | RRRKKKK |
| 2 | 161 | 166 | RRKKKK |
