PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462882964

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 329aa MW: 35885.3 Da PI: 6.0788

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462882964	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.8	3.5e-16	259	302	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r +r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ 462882964 259 RRHKRMIKNRESAARSRARKQAYTNELENKVSHLEEENERLKKQ 302 689**************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-12	255	327	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.507	257	302	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.3E-14	259	302	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.3E-15	259	307	No hit	No description
SuperFamily	SSF57959	1.44E-11	259	304	No hit	No description
CDD	cd14707	9.26E-27	259	306	No hit	No description
PROSITE pattern	PS00036	0	262	277	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MFMIQAMASQ TGGGTGGDAS SVHRGQGQGP SRQGSLYNLT LNEVQSHLGE PLLSMNFDEL 60 LKSVFPDGVD PDGTVAGNPE LIAGLQRQGS ITMPPQLSKK TVDEVWKGIQ DRPEILAEEG 120 GQRRKERQPT LGEMTLEDFL VKAGVVTEGY VKDPIDLPVN METVGSSVVG GTSNSNPGAQ 180 WLQQYKRQAL EPHQPSLGDP YMANQLAPQP LSVAPGAFLD SMYSDGPITS PMLGAFSDPQ 240 TPGRKRGASG EVADKVVERR HKRMIKNRES AARSRARKQA YTNELENKVS HLEEENERLK 300 KQKELDEILS SAPPPEPKYQ LRRANSAVF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462882964

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002439989.1	1e-168	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	5e-83	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	C5YZX9	1e-167	C5YZX9_SORBI; Uncharacterized protein
STRING	Sb09g023920.1	1e-168	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	8e-82	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]