 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462882673 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 185aa MW: 20420.3 Da PI: 10.0844 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462882673 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.3 | 9.8e-31 | 125 | 183 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ dp ++++tYegeH+h+
462882673 125 ADDHSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPADPAMLIVTYEGEHRHS 183
599***********************9888****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MLTLDLMGGG YGGRAEEQAA AIQEAAAAGL RGMEHLITQL QLSSRAAGET TAPTSAAQPE 60
QVDCREVTDM TVSKKHRVKR TIRVPAISPK VADIPADDHS WRKKHRVKRT IRVPAISPKV 120
ADIPADDHSW RKYGQKPIKG SPYPRGYYKC STVRGCPARK HVERDPADPA MLIVTYEGEH 180
RHSNH
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT039298 | 1e-78 | BT039298.1 Zea mays full-length cDNA clone ZM_BFc0004G13 mRNA, complete cds. |
| GenBank | BT042579 | 1e-78 | BT042579.1 Zea mays full-length cDNA clone ZM_BFb0345E21 mRNA, complete cds. |
| GenBank | EU966905 | 1e-78 | EU966905.1 Zea mays clone 298088 WRKY51 - superfamily of TFs having WRKY and zinc finger domains mRNA, complete cds. |
| GenBank | EU971702 | 1e-78 | EU971702.1 Zea mays clone 369394 mRNA sequence. |
