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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
462880850 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family |
B3 |
Protein Properties |
Length: 168aa MW: 18512 Da PI: 9.4487 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
462880850 | genome | Tef | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 69.5 | 4.6e-22 | 26 | 84 | 33 | 90 |
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL++gD++vF+++ e+
462880850 26 GVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSHSTYgPEK 84
567999*********************************************87554444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MSPTAVDYSS SASTATTESG AAQLPGVLLN FEDGEGKVWR FRYSYWNSSQ SYVLTKGWSR 60 FVREKGLRAG DTIVFSHSTY GPEKQLFIDC KKNKSTPAAT DAAPSPSPME KPKDQAHVVV 120 RLFGVDIARD GCQKRGRPIE IALEQGQQFL KKQCMAQHHT PALGAFLL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK065008 | 9e-76 | AK065008.1 Oryza sativa Japonica Group cDNA clone:J013001E21, full insert sequence. |
GenBank | AP002913 | 9e-76 | AP002913.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0480E02. |
GenBank | AP014957 | 9e-76 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
GenBank | CT828886 | 9e-76 | CT828886.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058B11, full insert sequence. |
GenBank | CU406271 | 9e-76 | CU406271.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C113A09, full insert sequence. |
GenBank | CU406451 | 9e-76 | CU406451.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C110I16, full insert sequence. |