PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462878855

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 438aa MW: 48351.7 Da PI: 8.7289

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462878855	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.1	6.7e-12	134	163	5	34
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34 k rr+++NReAAr+sR+RKka+i++Le 462878855 134 KTVRRLAQNREAARKSRLRKKAYIQQLESS 163 5679***********************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.4E-7	130	193	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.898	132	176	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.1E-8	134	176	No hit	No description
SuperFamily	SSF57959	1.41E-7	134	169	No hit	No description
Pfam	PF00170	5.6E-9	134	168	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	137	152	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.7E-29	214	287	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
YIKKLLVSKS SSEQKPSKEK LGFLWALACG SNLNPAFPIA ATAMSAARPV PTLDIFPSWP 60 MRSPHTPKEG SNVTAGSTGS ESSSKNSSDH SLDQLGAAAN MASHLDQVSQ QQEQQHKNIA 120 TSSTQRNVKI LDPKTVRRLA QNREAARKSR LRKKAYIQQL ESSKLKLSQM EHDIQQARAQ 180 GLLLGGASGA NTSSGAAMFD MEYTRWLDDH GRRMAELHRA LHAHLQDGEL RVIVDDTLTH 240 HDELFRLKAL AVKSDVFHLI TGVWTSPAER CFLWMGGFRP SDLLKTLLPQ LDPLTEQQVI 300 GICNLQQSSQ QAEEALSQGL EQLHQSLSDT MAGGSAIDDA NTSFMGQMAR ALGKLSNLEG 360 FVLQADNLRQ QTLHQMHRIL TVRQAARCFL AIGEYHNRLR ALSSLWASRP REILMADEGN 420 CGDQSIVAQP SPNQYSTF

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

YIKKLLVSKS SSEQKPSKEK LGFLWALACG SNLNPAFPIA ATAMSAARPV PTLDIFPSWP  60
MRSPHTPKEG SNVTAGSTGS ESSSKNSSDH SLDQLGAAAN MASHLDQVSQ QQEQQHKNIA  120
TSSTQRNVKI LDPKTVRRLA QNREAARKSR LRKKAYIQQL ESSKLKLSQM EHDIQQARAQ  180
GLLLGGASGA NTSSGAAMFD MEYTRWLDDH GRRMAELHRA LHAHLQDGEL RVIVDDTLTH  240
HDELFRLKAL AVKSDVFHLI TGVWTSPAER CFLWMGGFRP SDLLKTLLPQ LDPLTEQQVI  300
GICNLQQSSQ QAEEALSQGL EQLHQSLSDT MAGGSAIDDA NTSFMGQMAR ALGKLSNLEG  360
FVLQADNLRQ QTLHQMHRIL TVRQAARCFL AIGEYHNRLR ALSSLWASRP REILMADEGN  420
CGDQSIVAQP SPNQYSTF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462878855

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809311.1	0.0	transcription factor TGAL4-like isoform X2
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7E565	0.0	A0A2T7E565_9POAL; Uncharacterized protein
STRING	Sb05g003240.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-114	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]