PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462876742
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 334aa    MW: 37275 Da    PI: 9.3593
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462876742genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-104991446
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  462876742 49 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 91
               5899*************************86666666555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-846109IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2894892IPR004827Basic-leucine zipper domain
PfamPF001702.0E-75091IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-75093No hitNo description
Gene3DG3DSA:1.20.5.1708.2E-85295No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
PfamPF141447.6E-33132207IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MADASSRTDT STVLDTDDKN QRLENGQSGA AMASNSSDRS DRSDRPMDQK VLRRLAQNRE  60
AARKSRLRKK AYVQQLESSK LKLASLEQEL QKARQQGIFI SSSGDQTHAM SGNGAMTFDL  120
EYARWQEEQN KQINELRTAV NAHASDSDLR LIVDGIMAHY DEIFRQKGVA AKADVFHILS  180
GMWKTPAERC FLWLGGFRSS ELLKLLVNQL EPLTDQQMLG LSNLQQSSQQ AEDALSQGME  240
ALQQSLAETL AGSLGPSGSS GNVANYMGQM AMAMGKLGTL ENFLRQADNL RQQTLHQMQR  300
ILTIRQAARA LLAIHDYFSR LRALSSLWLA RPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462876742
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7278050.0KJ727805.1 Zea mays clone pUT5757 bZIP transcription factor (bZIP52) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558037.10.0transcription factor TGA2.2 isoform X1
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLI1H6280.0I1H628_BRADI; Uncharacterized protein
STRINGBRADI1G64060.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-135TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]