PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462875796
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 284aa    MW: 30741.1 Da    PI: 4.6323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462875796genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-16100147555
        AP2   5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  462875796 100 GVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 147
                9*****.**********32..2.24**********************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.29897155IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-2098156IPR016177DNA-binding domain
PRINTSPR003671.1E-798109IPR001471AP2/ERF domain
PfamPF008475.0E-1299147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-27100155IPR001471AP2/ERF domain
SMARTSM003801.1E-29100161IPR001471AP2/ERF domain
CDDcd000181.35E-15100157No hitNo description
PRINTSPR003671.1E-7121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MELEHYTPYS YCYSEAAPAV WPSSPAMATT DGDELRRELD ALALFLDSDD YESSDSFSSP  60
SSATCSEAAM ALPNMGYGQQ QYQEASSTPK KPAPAQSLIG VRKRPWGKFA AEIRDSTRKG  120
ARVWLGTFDT PEAAALAYDQ AAFSARGDAA VLNFPVDRVR ESLGAMALAA GNGSPVLALK  180
KRHSKRTRRR KLISPVISNN NVNQMTTHQL PAPKCSDDAS AVSGATMEVP WQQETAPHQC  240
SDTSAAPPPC QFDCSVNAVE LEDLGADHLD ELLWASSGLE YWDT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-241001551772Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462875796
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828658.16e-54ethylene-responsive transcription factor ERF094-like
TrEMBLA0A2T7CMG42e-55A0A2T7CMG4_9POAL; Uncharacterized protein
STRINGPavir.Hb01336.1.p1e-46(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.15e-33ethylene-responsive element binding factor 15