 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462875775 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
G2-like |
| Protein Properties |
Length: 502aa MW: 53937.6 Da PI: 10.4302 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462875775 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.7 | 4.8e-32 | 331 | 386 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
kpr++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
462875775 331 KPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 386
79****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 502 aa
Download sequence Send
to blast |
GIPRRIFTYA RSISFRPSVP IHHPHTTLLR LLAAFLCKNK SRKIRFLRDA PTPIPCLLPC 60
LVVSFPLSLP HGACRTTTTG GQSSPFTPPA GAAAASTCSR WRRSAARSRS SSASCPSVST 120
SSRRVRSHDL ASQLLSRLLL HVRPIERMRS QMDGVCSEET VSDHGPVLEE FMPLKPSLSR 180
PRAPPAGGVV VGKKEEDAPD HTRPETKKAM PDWLQSVQLW SQEPGQHQRA SSPHKELLPC 240
KPVARKAGGA FHPFEKEKRG VELPASSTTA AASSVVVGDS SGDNKAISVD DDDDTEKHNS 300
DKQEEASNNK DTASKDNKSK DKEGQSSSNR KPRRCWAPEL HRRFLQALQQ LGGSHVATPK 360
QIRELMKVDG LTNDEVKSHL QKYRLHTRRP NSTVQNTSAS AAPPAPQFVV VGGIWVPPPE 420
YAAAAAAAQP SVQLAADASG NASTVYAPVA TLPSGTQPQS QQKPQLIQRQ PSRCSDGRPS 480
GSAGDASSAS PAVSSSSQTT SP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-13 | 331 | 384 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-13 | 331 | 384 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-13 | 331 | 384 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-13 | 331 | 384 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by nitrate. {ECO:0000269|PubMed:23324170}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP091266 | 9e-94 | FP091266.1 Phyllostachys edulis cDNA clone: bphylf038j06, full insert sequence. |
