PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462873272
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 401aa    MW: 44931 Da    PI: 6.5238
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462873272genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10111151343
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                + k+ rr+++NReAAr+sR+RKka+i++Le+   +L +  +
  462873272 111 QEKVMRRLAQNREAARKSRLRKKAYIQQLETSRMKLAQLEQ 151
                56899*************************86555544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-7109173IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.301111155IPR004827Basic-leucine zipper domain
PfamPF001702.1E-7112152IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-7113156No hitNo description
CDDcd147086.07E-21113162No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-8115157No hitNo description
PROSITE patternPS000360116131IPR004827Basic-leucine zipper domain
PfamPF141445.8E-29200275IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MELYPGYLED HFNIHKLSIA SAAASPPEYM TSASAQFAAM PVRMGVYERP APARIGGMWS  60
SEPFKVDSGG QATSASTIME ADNKFDARLE DVPQVALEPT RSTDQETSKP QEKVMRRLAQ  120
NREAARKSRL RKKAYIQQLE TSRMKLAQLE QELQRARQQG VYANGNLGDS NLGFTGAVVD  180
PGVAAFEIEY GHWVDEQNRH TEELRNALQG QVTDLELSML VETGLSNYEH LFRIKSIAAH  240
SDVFYIMSGM WKTPAERFFL WIGGFRPSEV LKILRPQLEP LSEAQVIAVC GLQHTSTQAE  300
DALFQGMEKL QQNLAEALTV VDPFSSESYM LQMADAVGRL KELVGFVTQA DHLRQTTLQQ  360
MHKILTKRQA ARGLLALGDY FQRLRALSQL WAARPHESAI S
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap462873272
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823702.10.0transcription factor TGAL6-like isoform X1
RefseqXP_025823703.10.0transcription factor TGAL6-like isoform X1
SwissprotA0A0P0WFC80.0TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLA0A0A9D9I60.0A0A0A9D9I6_ARUDO; Uncharacterized protein
STRINGPavir.Gb00388.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-125TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]