PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462870894 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 506aa MW: 56151.2 Da PI: 6.7927 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.5 | 1e-11 | 167 | 197 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 ++k err+++NReAAr+sR+RKka++++Le+ 462870894 167 DDKMERRLAQNREAARKSRLRKKAYVQQLET 197 5899*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-6 | 165 | 243 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.094 | 167 | 211 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.3E-8 | 168 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-7 | 169 | 210 | No hit | No description |
SuperFamily | SSF57959 | 1.62E-6 | 169 | 210 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 172 | 187 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.1E-30 | 277 | 352 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 506 aa Download sequence Send to blast |
ELYSLSWCLV ILGDGRELQP TACFGELEKA LIHGSRTAVD PSMIGSDVHA NTAGYLAARP 60 PTLEIFPSWP MSHLQQPYSG NSQSVGSTSG SSSGQSTMPQ AAELVSPLST GADSGHQQEA 120 LMVTVDDYNY GQGLGATADT APIFQQHTAG QDKRKHGSTR KDGRLLDDKM ERRLAQNREA 180 ARKSRLRKKA YVQQLETCRI RLQQIEQELH RPRSQGSFQG GCSGPGDMSS GNHLIQLLRM 240 NSYGLTISYS STNGCVITGA IMFDMEYTRW LDDESKHLTE LRGALHAQLI DASLGVIVED 300 CMRHYDELFH LRAVLARSDV FHLMTGMWAT SAERCFLWMG GFRPSEILKM LIPQLDPLTE 360 QQLLGMYNLQ HSSEQAEEAL VQGLQQLHQS LADAVGAGPL NDGASVANYT GLMGLALDRL 420 DSLESFYRQA DNLRQQALHH MRRILTTRQT ARSFLSIGEY HRRLRALSTA WTCRPRENSA 480 ATENVSPTGA EHLMQHQYHQ SQFSGF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462870894 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961926.1 | 0.0 | transcription factor TGAL5 isoform X1 | ||||
Refseq | XP_022680634.1 | 0.0 | transcription factor TGAL5 isoform X1 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A368QHY5 | 0.0 | A0A368QHY5_SETIT; Uncharacterized protein | ||||
STRING | OMERI05G15000.1 | 0.0 | (Oryza meridionalis) | ||||
STRING | OS05T0443900-01 | 0.0 | (Oryza sativa) | ||||
STRING | Traes_1AL_3B659AABA.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3809 | 31 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-123 | bZIP family protein |
Publications ? help Back to Top | |||
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