PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462870859
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 286aa    MW: 32655.7 Da    PI: 10.0998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462870859genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-11163204351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV++  k+ +W A I++      +k+++lg+ gt +eAa+++++a+ 
  462870859 163 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 204
                79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.966138217IPR001471AP2/ERF domain
SMARTSM003801.3E-4162219IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-8162207IPR016177DNA-binding domain
PfamPF008471.0E-5162205IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-6165209IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MEGNRHENTP HQREKAEIDR VREISRSRRR REPSLYPSPT SSPTNFFSSP HPSLPCRLAA  60
APRWAPLTPA AGRPRRWHFK NGKDSLPVDL PKPIDTVEPV HANVKPFSVH PLPSTNISDV  120
LVESPNDTDS LKEERTQYYP GKEIKRRKRH RRKQYVDQEP CIMRGVYFKN MKWQAAIKVD  180
KKQIHLGTVG TQDEAARLYD RAAFMCGREP NFELSEEEKR ELQKYSWEDF LAVTRNTITS  240
KKLRKVGSLR RSKADLFMGQ SDGDTEMVNG GGSSNSDNGD GENSAS
Cis-element ? help Back to Top
SourceLink
PlantRegMap462870859
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.11e-129uncharacterized protein LOC100285135
TrEMBLC0P9B01e-127C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein
STRINGPavir.Aa01947.1.p1e-122(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-46ERF family protein