PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462870859 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | ERF | ||||||||
Protein Properties | Length: 286aa MW: 32655.7 Da PI: 10.0998 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.9 | 1.9e-11 | 163 | 204 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt +eAa+++++a+ 462870859 163 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 204 79**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.966 | 138 | 217 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-4 | 162 | 219 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-8 | 162 | 207 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.0E-5 | 162 | 205 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.0E-6 | 165 | 209 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MEGNRHENTP HQREKAEIDR VREISRSRRR REPSLYPSPT SSPTNFFSSP HPSLPCRLAA 60 APRWAPLTPA AGRPRRWHFK NGKDSLPVDL PKPIDTVEPV HANVKPFSVH PLPSTNISDV 120 LVESPNDTDS LKEERTQYYP GKEIKRRKRH RRKQYVDQEP CIMRGVYFKN MKWQAAIKVD 180 KKQIHLGTVG TQDEAARLYD RAAFMCGREP NFELSEEEKR ELQKYSWEDF LAVTRNTITS 240 KKLRKVGSLR RSKADLFMGQ SDGDTEMVNG GGSSNSDNGD GENSAS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462870859 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001151501.1 | 1e-129 | uncharacterized protein LOC100285135 | ||||
TrEMBL | C0P9B0 | 1e-127 | C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein | ||||
STRING | Pavir.Aa01947.1.p | 1e-122 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7516 | 35 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 2e-46 | ERF family protein |